DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and gsb

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_523863.1 Gene:gsb / 38005 FlyBaseID:FBgn0001148 Length:427 Species:Drosophila melanogaster


Alignment Length:39 Identity:9/39 - (23%)
Similarity:19/39 - (48%) Gaps:6/39 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   507 VKYPVTVLVRDPDTF----KTKYQKEVLRWLEDQGFING 541
            :.|.|.:.::.||..    :.:::...|||.:  .|.:|
  Fly    23 IGYHVRLHLKFPDKINSLHRRRHRPRCLRWFD--SFTHG 59

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649
gsbNP_523863.1 PAX 19..143 CDD:128645 9/39 (23%)
Homeodomain 186..242 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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