DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and HOXC12

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_776272.1 Gene:HOXC12 / 3228 HGNCID:5124 Length:282 Species:Homo sapiens


Alignment Length:332 Identity:75/332 - (22%)
Similarity:108/332 - (32%) Gaps:137/332 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SAPLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQ---RSPVSRSP-- 124
            |.|.|.:|.|...|.:|    |.|          ||              ||   .||||.:|  
Human    43 SYPRRDNVCSLSWPSAE----PCN----------GY--------------PQPYLGSPVSLNPPF 79

  Fly   125 ----------------SPPNAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRT 173
                            ..|.|.|.........:..||.:|.|.....:.|              :
Human    80 GRTCELARVEDGKGYYREPCAEGGGGGLKREERGRDPGAGPGAALLPLEP--------------S 130

  Fly   174 SPNAMAVRM--------------AGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPV 224
            .|.|:..:.              |||||   .||...:.:...:::|.:...:            
Human   131 GPPALGFKYDYAAGGGGGDGGGGAGPPH---DPPSCQSLESDSSSSLLNEGNK------------ 180

  Fly   225 PTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFP 289
              |...|     .||.:...:.|||         |....|:            ||          
Human   181 --GAGAG-----DPGSLVSPLNPGG---------GLSASGA------------PW---------- 207

  Fly   290 RFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNR 354
             :|.|...:..|||      :|..||.:||..|..|.::....|::|:..|:|::.|||:|||||
Human   208 -YPINSRSRKKRKP------YSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNR 265

  Fly   355 RTKHKRM 361
            |.|.||:
Human   266 RMKKKRL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 21/55 (38%)
HOXC12NP_776272.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..129 7/34 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..214 21/120 (18%)
Homeodomain 215..271 CDD:459649 24/61 (39%)

Return to query results.
Submit another query.