DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and HOXC6

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_004494.1 Gene:HOXC6 / 3223 HGNCID:5128 Length:235 Species:Homo sapiens


Alignment Length:148 Identity:46/148 - (31%)
Similarity:71/148 - (47%) Gaps:25/148 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 SAPHLIRDSYPLYPWL--LSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHY 327
            :||...:.|..:|||:  ::.|..:.        :...|  :|.|..:|..|.|:||..|..|.|
Human   111 TAPQDQKASIQIYPWMQRMNSHSGVG--------YGADR--RRGRQIYSRYQTLELEKEFHFNRY 165

  Fly   328 VVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAK 392
            :....|.::|..|.|||.|:|:||||||.|.|:           :||..|:..|||||...|.. 
Human   166 LTRRRRIEIANALCLTERQIKIWFQNRRMKWKK-----------ESNLTSTLSGGGGGATADSL- 218

  Fly   393 HDGSQHSYEDAEDPEDED 410
             .|.:...|:.|:.:.::
Human   219 -GGKEEKREETEEEKQKE 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 25/55 (45%)
HOXC6NP_004494.1 Antp-type hexapeptide 122..127 3/4 (75%)
Homeodomain 142..198 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..235 12/36 (33%)

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