DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and emx2

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_571355.2 Gene:emx2 / 30537 ZFINID:ZDB-GENE-990415-54 Length:247 Species:Danio rerio


Alignment Length:343 Identity:116/343 - (33%)
Similarity:137/343 - (39%) Gaps:138/343 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PKLAFSIDSIVGESSTRSAPLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRS 112
            ||..|:|:|:|.:.:    ||       |..|||.|..|.                    :|..:
Zfish     6 PKRCFTIESLVAKDN----PL-------PSSRSEEPIRPA--------------------ALSYA 39

  Fly   113 RSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPSSGTG---NPPTLIRPLPLPAPNLALIGNRTS 174
            .|.|.:|.                    .:|..|||.|   ||..:........||.|:      
Zfish    40 NSSQMNPF--------------------LNGFHSSGRGVYSNPGLVFAEAVSHPPNSAV------ 78

  Fly   175 PNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPG 239
                      |.|  |.|||.         |||.|               |....|.|||.....
Zfish    79 ----------PVH--SVPPPH---------ALAAH---------------PLSSSHSPHPLFASQ 107

  Fly   240 QIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGN------FLFQ 298
            |                              ||....||||:.|:..:..||.||      ||..
Zfish   108 Q------------------------------RDPSTFYPWLIHRYRYLGHRFQGNETSPESFLLH 142

  Fly   299 P--FRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR- 360
            .  .|||||:||||||:|||:||||||.|||||||||||||..||||||||||||||||||.|| 
Zfish   143 NALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 207

  Fly   361 -MQQEGGDGSDTKSNKGS 377
             :::||.|....|  ||:
Zfish   208 KLEEEGSDSQQKK--KGT 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 48/55 (87%)
emx2NP_571355.2 Homeodomain 150..206 CDD:459649 48/55 (87%)

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