DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and hoxb1b

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:294 Identity:73/294 - (24%)
Similarity:106/294 - (36%) Gaps:86/294 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 GNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPF 195
            |.| ..|||..|. |....|.....|:..|.   :|.:...:|. ::...:...|||        
Zfish    45 GRP-VGGNTFTSA-PHETHGTSYAQIQSQPF---HLNVDMGKTG-HSNFCKQTRPPH-------- 95

  Fly   196 LAAQFQMAAALAHHHQQQQQQQQQQLPP-----VPTGPPHGPH--PHLPPGQIPLGIFPGGPHPG 253
                    :...|.|...|.....:|..     |..|...|.:  .:..||.:....:....: |
Zfish    96 --------SDYGHQHVLTQADDHMRLQSPGFSVVNMGANIGTYSESNCRPGSVSASHYQSYAY-G 151

  Fly   254 HPPPHGHHPFGS---APHLIRDS------YPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKR---- 305
            .|.|||:..|..   :|....||      .|.:.|:..:                 |.|.:    
Zfish   152 EPEPHGYGSFSKYQVSPDSDSDSKTNIKQAPTFDWMKVK-----------------RNPPKTVKV 199

  Fly   306 -----------VRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHK 359
                       :||.|:..||.:||..|..|.|:..|.|.::|..|.|.|||||:||||||.|.|
Zfish   200 AEYGIHGQQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQK 264

  Fly   360 RMQQEG-------------GDGSD--TKSNKGSS 378
            :.::||             |..:|  |.|:.|:|
Zfish   265 KREKEGTAPVIKRVTLCSSGQNADHSTSSSPGAS 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 27/70 (39%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 4/18 (22%)
Antp-type hexapeptide 183..188 1/4 (25%)
Homeodomain 212..265 CDD:459649 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 8/34 (24%)

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