DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and hoxd9a

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_571201.3 Gene:hoxd9a / 30350 ZFINID:ZDB-GENE-990415-121 Length:262 Species:Danio rerio


Alignment Length:371 Identity:80/371 - (21%)
Similarity:122/371 - (32%) Gaps:160/371 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 STVSASASSKPKLAFSIDSIVGESS-----------TRSAPLRVSVI---------SSPPPRSES 82
            ||.||.:|      :.:|:|:|..:           :.:||.|.|.:         |..|..:..
Zfish     2 STSSALSS------YYVDTIMGHEAEDVYGARYIQGSHTAPARPSGVVENADFSSCSFAPKSAVF 60

  Fly    83 PAS------PTNTNNSGRRTPRGYIYCRRRDSLDRSR------SPQRSPVSRSPSPPNAGGNPAA 135
            |||      |:....||...|  |::   :..|..:|      .|..:.:|.:...||:      
Zfish    61 PASWSSVHQPSTAAVSGIYHP--YVH---QTHLSDNRYVRSWIEPVANHISLTGFHPNS------ 114

  Fly   136 AGNTAKSGDPSSGTGN---PPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFL- 196
                     ..|||..   ||                 .||...|...      ..||.|...| 
Zfish   115 ---------RHSGTKTESLPP-----------------KRTESAAFET------ETPSVPEFSLN 147

  Fly   197 --------AAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPG 253
                    |.:.::.:..:.|.:.:.::|||||.|                              
Zfish   148 AVSESADKATEERVGSDNSSHGEPKDEKQQQQLDP------------------------------ 182

  Fly   254 HPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKL 318
                               |.|...|:.:|..|                  :.|..::..|.|:|
Zfish   183 -------------------SNPAANWIHARSTR------------------KKRCPYTKYQTLEL 210

  Fly   319 EHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQE 364
            |..|..|.|:....|.::|:.|:|||.|||:||||||.|.|:|.:|
Zfish   211 EKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNRE 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 24/55 (44%)
hoxd9aNP_571201.3 Hox9_act 1..182 CDD:461369 47/228 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..187 24/166 (14%)
Homeodomain 196..252 CDD:459649 25/73 (34%)

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