Protein Alignment E5 and Hoxb1

DIOPT Version :10

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001094022.1
• Gene: Hoxb1 / 303491
• RGDID: 1310298
• Length: 297
• Species: Rattus norvegicus
• Alignment Length: 296
• Identity: 74/296 - (25%)
• Similarity: 107/296 - (36%)
• Gaps: 88/296 - (29%)

  Fly   110 DRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTS 174
            :|..|...:|.|..||        :|....:.:|:...|.|.|.:.::
  Rat    16 NRGPSAYSAPTSFPPS--------SAPAVDSYAGESRYGGGLPSSALQ----------------- 55

  Fly   175 PNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPG 239
                  :.:|  :|..|||..|...|..:|...:             .|....|.:||..:...|
  Rat    56 ------QNSG--YPVQQPPSSLGVSFPSSAPSGY-------------APAACNPSYGPSQYYSMG 99

  Fly   240 Q--------------IPLGIFP---------GGPHPGHPPPHGHHP---FGSAPHLIRD------ 272
            |              ..||..|         .||:|...||:|...   |.||..|:.:
  Rat   100 QSEGDGGYFHPSSYGAQLGGLPDSYGAGGVGSGPYPPPQPPYGTEQTSNFASAYDLLSEDKESSC 164

  Fly   273 -SYP------LYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVG 330
             |.|      .:.|:..:..   |.............|..:||.|:..||.:||..|..|.|:..
  Rat   165 SSEPSSLTARTFDWMKVKRN---PPKTAKVSELGLGTPGGLRTNFTTRQLTELEKEFHFNKYLSR 226

  Fly   331 AERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGG 366
            |.|.::|..|.|.|||||:||||||.|.|:.::|||
  Rat   227 ARRVEIAATLELNETQVKIWFQNRRMKQKKREREGG 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	27/55 (49%)
Hoxb1	NP_001094022.1	None