DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and noto

DIOPT Version :9

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_571130.1 Gene:noto / 30260 ZFINID:ZDB-GENE-990415-75 Length:241 Species:Danio rerio


Alignment Length:260 Identity:70/260 - (26%)
Similarity:102/260 - (39%) Gaps:54/260 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 AGPPH---PPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLG 244
            |.|.|   ..|...|.....|.:.|.||...|.:.:::......:....|      :....:|| 
Zfish    15 ARPLHQDYATSSSKPSTGKSFTIDALLARPDQAEMRERTNAYRSITNQTP------VSSSALPL- 72

  Fly   245 IFPGGPHPGHPPPHGHHPFGSAPHLIRDS-------YPLYPWLLSRHGRIFPR---FPGNFLFQP 299
            |:...||           |..:..:::..       ||.|.:..:..|.::.:   .....:...
Zfish    73 IYSQMPH-----------FAYSQSIMQTQTGYPVFCYPPYNFQTTCRGAVYAQDAVLAKAAVHSH 126

  Fly   300 FR----KPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR 360
            ::    |.||:||:|:..||.:||..|....|:||:||..||..|.|||.||||||||||.|.::
Zfish   127 YKHKSGKSKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRIKWRK 191

  Fly   361 MQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQHSYEDAEDPEDEDEIEEDDEDEVIDMDD 425
            ...|.......|...            ....|..|||     ..:.|:.|..||.|.|  ||:||
Zfish   192 QSLEQQQAKLAKLGL------------TVPPKSPGSQ-----GREDEERDFTEESDVD--IDIDD 237

  Fly   426  425
            Zfish   238  237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeobox 307..359 CDD:278475 30/51 (59%)
notoNP_571130.1 COG5576 79..>193 CDD:227863 39/124 (31%)
Homeobox 138..190 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.