Protein Alignment E5 and Cdx4

DIOPT Version :9

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001100412.1
• Gene: Cdx4 / 302400
• RGDID: 1561529
• Length: 288
• Species: Rattus norvegicus
• Alignment Length: 308
• Identity: 72/308 - (23%)
• Similarity: 102/308 - (33%)
• Gaps: 121/308 - (39%)

  Fly   128 NAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQP 192
            |.||     |:||..| .|.|:|:        ||||.|..               |.|.:|
  Rat    20 NPGG-----GSTAGVG-TSGGSGS--------PLPASNFT---------------AAPVYP---- 51

  Fly   193 PPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGP------HPHLPP------------- 238
                            |:        ...|.:....||||      .|:.||
  Rat    52 ----------------HY--------MGYPHMSNMDPHGPSLGAWSSPYSPPREDWSTYPGPSST 92

  Fly   239 -GQIPLG-IFPGGPHPGHP--------------PPHGHHPFGSAPHLI--------------RDS 273
             |.:|:. :....|..|.|              ...|..|..::..|:              |..
  Rat    93 MGTVPMNDMTSSSPAFGSPDYSTLGPTGGAGGASNGGSLPDAASESLVSIDSGTSGGATSPSRSR 157

  Fly   274 YPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQ 338
            :..|.|:     |...:..|.     .|..::.|..::..|.|:||..|..|.|:....:.:||.
  Rat   158 HSPYAWM-----RKTVQVTGK-----TRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAV 212

  Fly   339 GLSLTETQVKVWFQNRRTKHKRM-----QQEGGDGSDTKSNKGSSSGG 381
            .|.|:|.|||:||||||.|.::|     .|....|...:|:.||.|.|
  Rat   213 NLGLSERQVKIWFQNRRAKERKMIKKKISQFENSGGSVQSDSGSISPG 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeobox	307..359	CDD:278475	23/51 (45%)
Cdx4	NP_001100412.1	Caudal_act	13..166	CDD:398418	38/207 (18%)
		Homeobox	181..234	CDD:395001	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810