Protein Alignment E5 and Hoxd4

DIOPT Version :10

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 220
• Identity: 62/220 - (28%)
• Similarity: 84/220 - (38%)
• Gaps: 67/220 - (30%)

  Fly   229 PHGPHPHLPPGQIPLGIFPGGPHPGHPPP---HGHHPFGSAPHLIRDSYP--------------- 275
            |.|.:|....|:.|.|  .|||.||...|   ||..|.|...|......|
  Rat    48 PPGLYPRPDFGEQPFG--GGGPGPGSALPARGHGQEPSGPGSHYSAPGEPCPAPPPAPLPGARAC 110

  Fly   276 --------------------LYPWLLSRH-GRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLE 319
                                :|||:...| ..:.|.:.|.       :|||.|||::..|:|:||
  Rat   111 SQPTGPKQPPPGTALKQPAVVYPWMKKVHVNSVNPNYTGG-------EPKRSRTAYTRQQVLELE 168

  Fly   320 HAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTK----HKRMQQEGGDGSDTKSNKGSSSG 380
            ..|..|.|:....|.::|..|.|:|.|:|:||||||.|    ||....:|...|.:.|...|::
  Rat   169 KEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSCSSSAA- 232

  Fly   381 GGGGGDGEDDAKHDGSQHSYEDAED 405
                          .|||....|:|
  Rat   233 --------------PSQHLQPMAKD 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	27/59 (46%)
Hoxd4	NP_001099355.1	Homeodomain	153..209	CDD:459649	26/55 (47%)