DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and Nkx6-1

DIOPT Version :9

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_659204.1 Gene:Nkx6-1 / 18096 MGIID:1206039 Length:365 Species:Mus musculus


Alignment Length:447 Identity:115/447 - (25%)
Similarity:146/447 - (32%) Gaps:148/447 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVGESSTRSAPLRVSVISSPP 77
            |..||.|..|||||.::||.|....|  ......||..|..:.|:                 ..|
Mouse    41 PPLPTGPPSSSSSSSSSSSPSPPLGS--HNPGGLKPPAAGGLSSL-----------------GSP 86

  Fly    78 PRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKS 142
            |:..|.|:|...|                |.|.|            ||.|.|.|  ||..:.:.|
Mouse    87 PQQLSAATPHGIN----------------DILSR------------PSMPVASG--AALPSASPS 121

  Fly   143 GDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPH----PPSQPPPFLAAQFQMA 203
            |..||.:.:...........|...|.....:||..:   :||.|.    .|..|||.|......|
Mouse   122 GSSSSSSSSASATSASAAAAAAAAAAAAAASSPAGL---LAGLPRFSSLSPPPPPPGLYFSPSAA 183

  Fly   204 AALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPH 268
            |..|                  .|....|...| ||:.|: .:||   ....||.........||
Mouse   184 AVAA------------------VGRYPKPLAEL-PGRTPI-FWPG---VMQSPPWRDARLACTPH 225

  Fly   269 LIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAER 333
                                   .|:.|.....|.|..|..||..|:..||..||...|:.|.||
Mouse   226 -----------------------QGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPER 267

  Fly   334 KQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQH 398
            .:||..|.:||:||||||||||||.::                               ||.....
Mouse   268 ARLAYSLGMTESQVKVWFQNRRTKWRK-------------------------------KHAAEMA 301

  Fly   399 SYEDAEDPEDE-----DEIEEDDEDEVIDMDDYGSEMDAEEHQRLREQFQQQLAQHQ 450
            :.:..:|.|.|     .|.||||       |||...:|.....   |:..|.|.:|:
Mouse   302 TAKKKQDSETERLKGTSENEEDD-------DDYNKPLDPNSDD---EKITQLLKKHK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeobox 307..359 CDD:278475 29/51 (57%)
Nkx6-1NP_659204.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..136 37/143 (26%)
Repressor domain. /evidence=ECO:0000250 102..269 56/229 (24%)
Homeobox 240..293 CDD:278475 29/52 (56%)
DUF3381 <291..345 CDD:288694 17/94 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..365 18/64 (28%)
Involved in DNA-binding. /evidence=ECO:0000250 307..365 16/52 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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