Protein Alignment E5 and nob-1

DIOPT Version :10

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001369824.1
• Gene: nob-1 / 176641
• WormBaseID: WBGene00003779
• Length: 243
• Species: Caenorhabditis elegans
• Alignment Length: 283
• Identity: 61/283 - (21%)
• Similarity: 90/283 - (31%)
• Gaps: 102/283 - (36%)

  Fly   107 DSLDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGN 171
            ||.:...|.|::|..   .|..|...|:..|.:  ..:..|.||:.|.|       ||:..   .
 Worm    16 DSKESITSVQQTPFF---WPSAAAAIPSIQGES--RSERESETGSSPQL-------APSST---G 65

  Fly   172 RTSPNAMAVRMAGPPHPPSQPPPFLAAQFQM---------------AAALAHHHQQQQQQQQQQL 221
            ...|....:...||...|:      |.:|.|               :.....:.|..|......:
 Worm    66 MVMPGTAGMYGFGPSRMPT------ANEFGMMMNPVYTDFYQNPLASTGWYSYGQPYQFTANYSI 124

  Fly   222 P-----------PVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYP 275
            |           |...|......|:                             :|.||
 Worm   125 PSLDGNLSDITIPTTAGSSAATTPN-----------------------------AAMHL------ 154

  Fly   276 LYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGL 340
              ||.:|..|                  |:.|..:...|:.:||:.:..|.|:....|.:|:..|
 Worm   155 --PWAISHDG------------------KKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQL 199

  Fly   341 SLTETQVKVWFQNRRTKHKRMQQ 363
            .|.|.||||||||||.|.|:::|
 Worm   200 MLDEKQVKVWFQNRRMKDKKLRQ 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	23/55 (42%)
nob-1	NP_001369824.1	Homeodomain	163..219	CDD:459649	23/55 (42%)