DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and ceh-43

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001338832.1 Gene:ceh-43 / 175581 WormBaseID:WBGene00000463 Length:282 Species:Caenorhabditis elegans


Alignment Length:283 Identity:65/283 - (22%)
Similarity:101/283 - (35%) Gaps:82/283 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 PSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPL--------GI 245
            ||:...::|..:...:.:|              ||...|......|:.|....|.        |.
 Worm     3 PSKGFEYVAGDYYQTSGVA--------------PPTSNGAGSNVSPYFPYHAYPTSSTNGATGGS 53

  Fly   246 FPGGP-----HPGHPPPHGHHPFGSAPH-----LIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPF 300
            ..|.|     :..:||..|..|..:.|.     ::......|                |...:..
 Worm    54 MYGTPQQTSAYAMYPPGPGSSPEEAFPEHTTTKIVEGCEAKY----------------NVKGKKM 102

  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQ--GLS-------LTETQVKVWFQNRRT 356
            |||   ||.::.:||..|:..|:...|:...:|..||.  |||       :||.|||:||||||:
 Worm   103 RKP---RTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQRAQPITEFQVKIWFQNRRS 164

  Fly   357 KHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQHSYEDAEDPEDEDEIEEDDEDEVI 421
            |.|:.:                   ||..|...|.:.|.::.|..::....:...|:|..|...:
 Worm   165 KQKKQK-------------------GGSSDHASDEEDDDTEESKPESPPMGESVMIQESSEPRTL 210

  Fly   422 DMDDYGSEMDAEEH--QRLREQF 442
            ......:|| .||:  ..|.||:
 Worm   211 VSSSIKTEM-KEEYPPMTLNEQY 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 25/64 (39%)
ceh-43NP_001338832.1 Homeodomain 103..168 CDD:459649 28/67 (42%)

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