DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and NKX6-3

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001351770.1 Gene:NKX6-3 / 157848 HGNCID:26328 Length:265 Species:Homo sapiens


Alignment Length:247 Identity:74/247 - (29%)
Similarity:96/247 - (38%) Gaps:54/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 AQF-QMAAALAHHHQQQQQQQQQQLPPVPTGP------PHG-----PHPHLPPGQIPLGIFPGGP 250
            ||| :|.|.:.   |...|....:|.|...||      |||     ..|...|..   .:..|.|
Human    17 AQFPEMKAPVC---QYSVQNSFYKLSPPGLGPQLAAGTPHGITDILSRPVAAPNN---SLLSGYP 75

  Fly   251 HPG-----------HPPPHGHHPFGSAPHLIRDSYPL----------YPWLLSRHGRIFPRFPGN 294
            |..           :.|..|:  |..|    .:.||.          ..|   |.||.....| :
Human    76 HVAGFGGLSSQGVYYSPQVGN--FSKA----GNEYPTRTRNCWADTGQDW---RGGRQCSNTP-D 130

  Fly   295 FLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHK 359
            .|.....|.|..|..|:..|:..||..||...|:.|.||.:||..|.:||:||||||||||||.:
Human   131 PLSDSIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 195

  Fly   360 RMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQHSYEDAEDPEDEDE 411
            :.     ...:..|:...:.||.|.|.|.|.|..:.....|....||:.:||
Human   196 KK-----SALEPSSSTPRAPGGAGAGAGGDRAPSENEDDEYNKPLDPDSDDE 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 29/55 (53%)
NKX6-3NP_001351770.1 Homeodomain 138..196 CDD:459649 30/57 (53%)

Return to query results.
Submit another query.