DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and Vsx1

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_473409.1 Gene:Vsx1 / 114889 MGIID:1890816 Length:363 Species:Mus musculus


Alignment Length:417 Identity:98/417 - (23%)
Similarity:138/417 - (33%) Gaps:132/417 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RDSLDRSRSPQRSPVSRSPSPPNAGG------------------NPAAAGNTAKSGDPSSGTGNP 152
            ||.|..:||..|   :.:|..|..|.                  .||..|..:.||||:...|:.
Mouse     4 RDGLSDARSRSR---ALAPGCPPTGSRLRSFAINDLLGLEADLPTPAEPGLRSNSGDPAEAIGSG 65

  Fly   153 PTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQ 217
                     |.|...|.|:..:..|:.:.:.......:|||...||.......||          
Mouse    66 ---------PGPGPGLCGSCPARGALPLGLGLLCGFGAQPPSAAAAARARCLLLA---------- 111

  Fly   218 QQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPH-GHH--------PFGSAPHLIRDS 273
              .|..:|:.   ||.|.:..|            |.||||. |..        ..|.:|...::.
Mouse   112 --DLRLLPSA---GPEPAVAQG------------PVHPPPALGSQQRSESVSTSDGDSPSEEKND 159

  Fly   274 YPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQ 338
             |....:|.:                 ||.:|.||.|:..||.:||.||...||.....|:.||.
Mouse   160 -PKMSLILGK-----------------RKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAA 206

  Fly   339 GLSLTETQVKVWFQNRRTKHKRMQQEGGDGS-------------------DTKSNKGSSSGGG-- 382
            ...|.|.:::|||||||.|.::.::..|..|                   |:..|...|..|.  
Mouse   207 KTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSADSLQGSCA 271

  Fly   383 -----------GGGDGEDDAKHDG---SQHSYEDAEDPEDEDEIEEDD---------EDEVIDMD 424
                       |....|.:.|..|   ..|..:.|...||..|...|:         ||..||: 
Mouse   272 PWLLGMHKKSTGMRKPESEDKLAGLWEFDHLKKGANKDEDGPERGPDETTQNPENSLEDVAIDL- 335

  Fly   425 DYGSEMDAEEHQRLREQFQQQLAQHQQ 451
               |....:|.:::......||.|..|
Mouse   336 ---SSSSRQETKKMPPGSSTQLPQPPQ 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 25/55 (45%)
Vsx1NP_473409.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 8/23 (35%)
Octapeptide motif 31..38 0/6 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..66 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..166 11/56 (20%)
Nuclear localization signal. /evidence=ECO:0000255 168..173 2/21 (10%)
Homeodomain 172..228 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..363 16/64 (25%)

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