DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and CDX4

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_005184.1 Gene:CDX4 / 1046 HGNCID:1808 Length:284 Species:Homo sapiens


Alignment Length:264 Identity:66/264 - (25%)
Similarity:91/264 - (34%) Gaps:75/264 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGP-- 232
            |...||........|.......|.|  |:.|..|.|.:|:         ...|.:|:..||.|  
Human    16 GTLMSPGGDGTAGTGGTGGGGSPMP--ASNFAAAPAFSHY---------MGYPHMPSMDPHWPSL 69

  Fly   233 ----HPHLPP--------------GQIP------------------LGIFPGGPH----PGHP-- 255
                .|:.||              |.:|                  ||...||..    ||..  
Human    70 GVWGSPYSPPREDWSVYPGPSSTMGTVPVNDVTSSPAAFCSTDYSNLGPVGGGTSGSSLPGQAGG 134

  Fly   256 ---PPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLK 317
               |........|:|.  |..:..|.|:     |...:..|.     .|..::.|..::..|.|:
Human   135 SLVPTDAGAAKASSPS--RSRHSPYAWM-----RKTVQVTGK-----TRTKEKYRVVYTDHQRLE 187

  Fly   318 LEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRM-----QQEGGDGSDTKSNKGS 377
            ||..|..|.|:....:.:||..|.|:|.|||:||||||.|.::|     .|....|...:|:..|
Human   188 LEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQFENSGGSVQSDSDS 252

  Fly   378 SSGG 381
            .|.|
Human   253 ISPG 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 23/55 (42%)
CDX4NP_005184.1 Caudal_act 13..170 CDD:461413 35/176 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..40 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..155 8/36 (22%)
Homeodomain 175..230 CDD:459649 23/54 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..259 6/19 (32%)

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