DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and CDX2

DIOPT Version :9

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_011533177.1 Gene:CDX2 / 1045 HGNCID:1806 Length:321 Species:Homo sapiens


Alignment Length:317 Identity:76/317 - (23%)
Similarity:111/317 - (35%) Gaps:109/317 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PTNTNNSG--RRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGG-NPAAAGNTAKSGD--P 145
            |::..:||  ...|:.::                ||    |..|:.|| :.|||...|.:.|  .
Human    15 PSSVRHSGGLNLAPQNFV----------------SP----PQYPDYGGYHVAAAAAAAANLDSAQ 59

  Fly   146 SSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHH 210
            |.|...|.....||.......|..|...:.||:|..:.|     ..|          |||:.:  
Human    60 SPGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNG-----GSP----------AAAMGY-- 107

  Fly   211 QQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPH----LIR 271
                            ..|...|||               |  ||..|.||| .:||.    |::
Human   108 ----------------SSPADYHPH---------------H--HPHHHPHHP-AAAPSCASGLLQ 138

  Fly   272 --DSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKP----------------------KRVRTAFSP 312
              :..|..|...:...::.|......|.:..|||                      .:.|..::.
Human   139 TLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKPAQQSLGSQALTSPSSTVKTRTKDKYRVVYTD 203

  Fly   313 TQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKH-----KRMQQE 364
            .|.|:||..|..:.|:....:.:||..|.|:|.|||:||||||.|.     |::||:
Human   204 HQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQ 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeobox 307..359 CDD:278475 22/56 (39%)
CDX2XP_011533177.1 Caudal_act 13..171 CDD:282574 48/226 (21%)
Homeobox 198..250 CDD:278475 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.900

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