DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and CDX1

DIOPT Version :9

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001795.2 Gene:CDX1 / 1044 HGNCID:1805 Length:265 Species:Homo sapiens


Alignment Length:265 Identity:71/265 - (26%)
Similarity:96/265 - (36%) Gaps:74/265 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 IRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQ 220
            :.|.|....:|.|     .|.|.     |||.||..||     |:...::.:|       .:...
Human    13 VYPGPARPASLGL-----GPQAY-----GPPAPPPAPP-----QYPDFSSYSH-------VEPAP 55

  Fly   221 LPPVPTGPP-----------HGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSY 274
            .||...|.|           :||.|..|... |..:..|.|....|.|   .|.|..|.|:  :.
Human    56 APPTAWGAPFPAPKDDWAAAYGPGPAAPAAS-PASLAFGPPPDFSPVP---APPGPGPGLL--AQ 114

  Fly   275 PLYPWLLSRHGRIFPRFPGNFLFQPF------------------RKPKRVRTAFSPTQLLKLEHA 321
            ||       .|...|..||.....|:                  |...:.|..::..|.|:||..
Human   115 PL-------GGPGTPSSPGAQRPTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKE 172

  Fly   322 FEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTK----HKRMQQEGGDGSD------TKSNKG 376
            |..:.|:....:.:||..|.|||.|||:||||||.|    :|:.||:......      |.:..|
Human   173 FHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQPPQPPMAHDITATPAG 237

  Fly   377 SSSGG 381
            .|.||
Human   238 PSLGG 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeobox 307..359 CDD:278475 23/55 (42%)
CDX1NP_001795.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 9..153 39/174 (22%)
Caudal_act 13..138 CDD:282574 39/159 (25%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536 157..178 6/20 (30%)
Homeobox 158..210 CDD:278475 23/51 (45%)
Interaction with 5-mCpG DNA. /evidence=ECO:0000305|PubMed:28473536 196..207 8/10 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..265 9/36 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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