DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and prrx1

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_004913839.1 Gene:prrx1 / 100494324 XenbaseID:XB-GENE-484663 Length:248 Species:Xenopus tropicalis


Alignment Length:86 Identity:35/86 - (40%)
Similarity:49/86 - (56%) Gaps:6/86 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEG 365
            ||.:|.||.|:.:||..||..||..||.....|:.||:.::|||.:|:|||||||.|.:|.::. 
 Frog    95 RKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERA- 158

  Fly   366 GDGSDTKSNKGSSSGGGGGGD 386
                 ..:||.:|......||
 Frog   159 -----MLANKNASLLKSYAGD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 27/55 (49%)
prrx1XP_004913839.1 Homeodomain 102..154 CDD:459649 25/51 (49%)
OAR 221..238 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.