DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and alx4

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_004913406.1 Gene:alx4 / 100493396 XenbaseID:XB-GENE-853003 Length:376 Species:Xenopus tropicalis


Alignment Length:178 Identity:50/178 - (28%)
Similarity:66/178 - (37%) Gaps:42/178 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 AHHHQQQQQQQQQQLPPVPTGPPHGP--------HPHLPPGQIPLGIFPGGPHPGHPPPH----- 258
            |||...||||....:...|...|...        .|.:|.......:.|...|.|....:     
 Frog    89 AHHPSHQQQQSHLYMQSTPCKSPSDSLKVQDSPGDPLIPCYAKESALTPNSDHQGMDSGYITSKE 153

  Fly   259 ----GHHPFGSA--PHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLK 317
                |....||.  |....:|.       |..|                |.:|.||.|:..||.:
 Frog   154 TAGKGSQDRGSGDLPMDKTESE-------SNKG----------------KKRRNRTTFTSYQLEE 195

  Fly   318 LEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEG 365
            ||..|:..||.....|:|||....|||.:|:|||||||.|.::.::.|
 Frog   196 LEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFG 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 27/55 (49%)
alx4XP_004913406.1 COG5576 120..266 CDD:227863 41/147 (28%)
Homeodomain 182..238 CDD:459649 27/55 (49%)
OAR 352..370 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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