Protein Alignment E5 and Hoxb2

DIOPT Version :10

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 243
• Identity: 76/243 - (31%)
• Similarity: 96/243 - (39%)
• Gaps: 61/243 - (25%)

  Fly   194 PFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPP-HGPHPHLPPG----QIPLGIFPGGPHPG 253
            |.||.......|:....|....::...:||.|  || ....|.|..|    |.|....|.|..|.
  Rat    16 PSLAECLTSFPAVLETFQTSSIKESTLIPPPP--PPLEQTFPSLQLGASTLQRPGSQKPAGDGPA 78

  Fly   254 -HPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFP--------------RFPGNFLFQPFRKP 303
             .|||    |...||     ..|.:||:..:.....|              |..|  :..|...|
  Rat    79 LRPPP----PLPVAP-----PAPEFPWMKEKKSAKKPSQSAATPSPAASSVRASG--VGSPSDGP 132

  Fly   304 ----------KRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKH 358
                      :|:|||::.||||:||..|..|.|:....|.::|..|.|||.||||||||||.||
  Rat   133 GLPESGGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 197

  Fly   359 KRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQHSYEDAEDP 406
            ||..|          ::....|..||...:|||.        |.||:|
  Rat   198 KRQTQ----------HREPPDGEPGGLSAQDDAG--------EPAEEP 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	31/55 (56%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	31/55 (56%)