DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and AT5G10190

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_196581.1 Gene:AT5G10190 / 830883 AraportID:AT5G10190 Length:488 Species:Arabidopsis thaliana


Alignment Length:435 Identity:96/435 - (22%)
Similarity:176/435 - (40%) Gaps:55/435 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RSQWFTVTVLCFVNLINYMDRFTIAGVLTDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGD 175
            :|:..|:.::....::...|...:.||..:|.:...:...:.|.|.....|....|.|:..||..
plant     2 KSETLTLVLVYLAGIMERADESLLPGVYKEVGDALHVDPTALGTLTLFRSIVQSSCYPLAAYLSS 66

  Fly   176 RYSRPWIMAVGVGLWSTTTLLGSFMKQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKM 240
            |::|..::|:|..||:|.|.|.:....|......|.|.|||.|..:....::::|......|...
plant    67 RHNRAHVIALGAFLWATATFLVAVSTTFFQVAVSRGLNGIGLAIVTPAIQSLVADSTDDYNRGMA 131

  Fly   241 LALFYFAIPVGSGLGYI----VGSKTAHLANDWRWALRVTPILGIVAVFLI-LLIKDPVRGHSEG 300
            .....|...:||.|||:    ..||:.:....||.|..:..::.::...|: |...||.....:.
plant   132 FGWLGFTSNIGSILGYVCSILFASKSFNGVAGWRIAFLLVAVVSVIVGILVRLFATDPHYSDRKI 196

  Fly   301 SHNLEATTYKQDIKALVRNRSFMLSTAGFTCVAFVA----GALAWWGPSFIYLGMKMQPGNENIV 361
            :.:::...:..||:.|::....::....|.  .|||    |:..|...:|..|.:::        
plant   197 TKHVKDKPFWSDIRDLLKEAKMVIKIPSFQ--IFVAQGVSGSFPWSALAFAPLWLEL-------- 251

  Fly   362 QDDVAFNFGVITMLAGL------LGVPLGSFLSQYLVKRYPTA-----DPVICAFGLLVSAPLLT 415
               :.|:.....:|..|      ||...|.::...|.|::|..     ..|.....:.::|.||.
plant   252 ---IGFSHKTTAVLVTLFTISCSLGGLFGGYMGDTLAKKFPNGGRIFLSQVSSGSAIPLAAILLI 313

  Fly   416 GACLLVNSNSVG---TYALIFFGQLALNLNWAIVADILLYVVVPTRRSTA-----EAFQ-ILISH 471
            |   |.:..|..   ...|:..| |.::.|.|.....:...:||.|..|:     .:|: ||.|.
plant   314 G---LPDDPSTAFSHGLVLVIMG-LCISWNGAATNGPIFAEIVPERARTSIYALDRSFESILASF 374

  Fly   472 ALGDAGSPYLVGAISEAIMKHLHKNPSDSGLTTELRSMSQVAGSA 516
            |      |.:||.:::.|..:   .|...|.|:.::..:..|.:|
plant   375 A------PPIVGMLAQNIYGY---KPIPEGSTSSVKIDTDRANAA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 88/400 (22%)
MFS_1 120..462 CDD:284993 79/364 (22%)
AT5G10190NP_196581.1 MFS 8..386 CDD:119392 88/400 (22%)
MFS_1 11..376 CDD:284993 85/387 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D891881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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