DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and AT2G18590

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_179449.5 Gene:AT2G18590 / 816374 AraportID:AT2G18590 Length:473 Species:Arabidopsis thaliana


Alignment Length:444 Identity:98/444 - (22%)
Similarity:163/444 - (36%) Gaps:89/444 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LCFVNLINYM---DRFTIAGVLTDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPW 181
            |..:||...|   |...|.....:::..|.......|||..:..|...:.:|:.|.....|.||.
plant    15 LIIINLATMMQRADEKLIPSTAKELKEAFHAKLSDIGLLSFIRNIVQGLASPLAGLFAISYDRPT 79

  Fly   182 IMAVGVGLWSTTTLLGSFMKQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYF 246
            :.|.|...|.::|:.....:.|.......|..|:|.|....:..:||:|.|....|.....|:..
plant    80 VFAFGSFFWVSSTVATGVSRYFIQVTLGVAFNGVGHAIVYPVLQSIIADSFKESSRGFGFGLWNL 144

  Fly   247 AIPVGSGLGYIVGSKTAHLAND------WRWALRVTPILG-IVAVFLILLIKDP-------VRGH 297
            ...||...|.:|  .|....:|      ||.|..::..|. ||.:.:...:.||       |..|
plant   145 IGTVGGIGGTVV--PTVMAGHDFFGISGWRCAFILSATLSTIVGILVFFFVSDPREKKTSSVIVH 207

  Fly   298 SEGSHNLE------------ATTYKQD---IKALVRNRSFMLSTAGFTCVAFVAGALAW-----W 342
            .:..|..:            ::.:|:.   ||.:.:.|:|.:     ..:..:.|::.|     |
plant   208 HDDQHERDENNGGTMMESPSSSVWKESWVAIKDVTKLRTFQI-----IVLQGIVGSVPWNAMLFW 267

  Fly   343 GPSFIYLGMKMQPGNENIVQDDVAFNFGVITMLAGL------LGVPLGSFLSQYLVKRYPTADPV 401
            ...|..:|                |:.....:|.|:      :|..:|..::..:.:.:|.:..:
plant   268 TMWFELIG----------------FDHNQAALLNGIFATGQAIGSLVGGIIADKMSRVFPNSGRL 316

  Fly   402 ICA-----FGLLVSAPLLTGACLLVNSNSVGTYALIFFGQLALNLNW---AIVADILLYVVVPTR 458
            |||     .|.:.|..||......|||..:....|...|   |.:.|   ||.:.||..:|....
plant   317 ICAQFSVFMGAMFSIVLLRMIPQSVNSFYIFLVTLFLMG---LTITWCGPAINSPILAEIVPAKH 378

  Fly   459 RSTAEAFQILISHALGDAGSPYLVGAISEAI-------MKHLHKNPSDSGLTTE 505
            |:...||...:.......|:| |||.:||.:       :.|:    :|||...|
plant   379 RTMVYAFDRALEVTFSSFGAP-LVGIMSEKLFGFDAKGIDHV----NDSGREAE 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 93/419 (22%)
MFS_1 120..462 CDD:284993 84/392 (21%)
AT2G18590NP_179449.5 MFS 20..406 CDD:119392 89/412 (22%)
MFS_1 31..385 CDD:284993 79/379 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D891881at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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