DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spin and Spns1

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001034297.2 Gene:Spns1 / 361648 RGDID:1305613 Length:528 Species:Rattus norvegicus


Alignment Length:525 Identity:246/525 - (46%)
Similarity:319/525 - (60%) Gaps:79/525 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 PGIP-------------PSAVVPSRLSSVGRS-QWFTVTVLCFVNLINYMDRFTIAGVLTDVRND 144
            ||:|             |......|::.:.|. ....|.|||::||:|||||||:||||||:...
  Rat    25 PGLPGPMGNPKSGELEVPDCEGLQRITGLSRGHSTLIVVVLCYINLLNYMDRFTVAGVLTDIEQF 89

  Fly   145 FDIGNDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLGSFM-KQFGWFIA 208
            |:||:.|.||:||||:.||||.||:||||||||:|.::|..|:..||..||..||: ::..|.:.
  Rat    90 FNIGDGSTGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPREHFWLLL 154

  Fly   209 F-RALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPVGSGLGYIVGSKTAHLANDWRWA 272
            . |.|||:|||||||||||:|:||||.|.||:||::||||||||||||||.|||...||.||.||
  Rat   155 LTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDLAGDWHWA 219

  Fly   273 LRVTPILGIVAVFLI-LLIKDPVRG----HSEGSHNLEATTYKQDIKALVRNRSFMLSTAGFTCV 332
            |||||.||::||.|: |::::|.||    || ||..|..|::..|:|||.||.||:||:.|||.|
  Rat   220 LRVTPGLGVLAVLLLFLVVQEPPRGAVERHS-GSPPLSPTSWWADLKALARNPSFVLSSLGFTAV 283

  Fly   333 AFVAGALAWWGPSF-----IYLG--MKMQPGNENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQY 390
            |||.|:||.|.|:|     :.||  ....||:.....|.:.  ||:||.|.|:|||.||..:|:.
  Rat   284 AFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLI--FGLITCLTGVLGVGLGVEISRR 346

  Fly   391 LVKRYPTADPVICAFGLLVSAPLLTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILLYVVV 455
            |.:..|.|||::||.|||.|:|.|..:......:.|.||..||.|:..|::|||||||||||||:
  Rat   347 LRRFNPRADPLVCAAGLLGSSPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVI 411

  Fly   456 PTRRSTAEAFQILISHALGDAGSPYLVGAISEAIMKHLHKNPSDSGLTTELRSMSQVAGSAISNA 520
            ||||||||||||::||.|||||||||:|.||:.:.:                             
  Rat   412 PTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRR----------------------------- 447

  Fly   521 TQVIAEATTSLMETARSSASQEYSDVEQFEGLQYALFSTSFVEVLGGIFFIFTACFIIKDKYNAT 585
                               |...|.:.:|..||::|...:||..|||..|:.||.||..|:..|.
  Rat   448 -------------------SWPPSFLSEFRALQFSLMLCAFVGALGGAAFLGTAMFIENDRRRAQ 493

  Fly   586 RGLQG 590
            ..:||
  Rat   494 LHVQG 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 220/385 (57%)
MFS_1 120..462 CDD:284993 197/355 (55%)
Spns1NP_001034297.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 3/12 (25%)
MFS 62..450 CDD:119392 221/438 (50%)
MFS_1 65..418 CDD:284993 197/355 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337294
Domainoid 1 1.000 355 1.000 Domainoid score I959
eggNOG 1 0.900 - - E2759_KOG1330
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41530
Inparanoid 1 1.050 422 1.000 Inparanoid score I1724
OMA 1 1.010 - - QHG56526
OrthoDB 1 1.010 - - D360635at33208
OrthoFinder 1 1.000 - - FOG0000708
OrthoInspector 1 1.000 - - otm45890
orthoMCL 1 0.900 - - OOG6_101629
Panther 1 1.100 - - LDO PTHR23505
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X211
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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