DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and SPAC1002.16c

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_593504.1 Gene:SPAC1002.16c / 2543262 PomBaseID:SPAC1002.16c Length:499 Species:Schizosaccharomyces pombe


Alignment Length:542 Identity:110/542 - (20%)
Similarity:190/542 - (35%) Gaps:181/542 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SSGSSGS-----SSSEEGGSREDVANLSPLGLPTTYSSQQLMPSDTDSMEEERHRLRPHHHHHHP 86
            |:.|:||     ..||:..||.:.|  ||:.:..|:    |..|:.||:                
pombe     9 SNKSNGSIFTKADESEKVISRSNTA--SPISIENTH----LTKSERDSL---------------- 51

  Fly    87 LGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCFVNLINYMDRFTIAGV-LTDVRNDFDIGND 150
                                  :.|........:..:.|:.::||..|... :..:..|..:..|
pombe    52 ----------------------LFRLDLVLAPTIMILYLVAFLDRSNIGNAKVAGLPEDLKLKGD 94

  Fly   151 SAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLGSFMKQFGWFIAFRALVGI 215
            ...::.:||.:::::.......|..:.....::|..|..:|.||:...|...||..:|.|.::|.
pombe    95 QFNIIASVFYVTFILFEMPTTLLMKKVQPKRMLAFIVISYSLTTIFTGFCHNFGGLLAARLVLGF 159

  Fly   216 GEAS------------YSTI--APTIISDLFVHDMRSKML-ALFYFAIPVGSGLGYIVGSKTAHL 265
            .||.            ||.:  ||. |:.||.....|... .||.:|:....|:|...|      
pombe   160 CEAGLFPCLALYLTMIYSRVELAPR-IAYLFASSALSGAFGGLFAYAVLHMDGVGGFAG------ 217

  Fly   266 ANDWRWALRVTPILGI---VAVFLIL---------LIK---DPVRGHS-EGSHNLEA-------- 306
               |||...:..::|.   |||:.|:         |.|   :.:|... |.:.:|||        
pombe   218 ---WRWLFIIEGLIGFVCGVAVYFIIPNDITKAWFLSKTHQEMMRKRQLERAADLEAAHFDWKGV 279

  Fly   307 ----TTYK----------QD---------IKALVRNRSF-MLSTAGFTCVAFVAGALAWWGPSFI 347
                |.:|          ||         :.|::....: .||....|...::.||..:...||:
pombe   280 KSAFTDFKVYLYALSEFGQDTCLYGFSTFLPAIISGMGYTSLSVQYMTIPVYILGAATYIAASFL 344

  Fly   348 YLGMKMQPGNENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQYLVKRYPTADPVICAFGLLV--- 409
                           .|...:.|:|.::..:.                    |::....||.   
pombe   345 ---------------SDRFHHRGIILIIGNIF--------------------PIVGYILLLACQN 374

  Fly   410 SAPLLTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILLYVVVPTRRSTAEAFQILISHALG 474
            :..:|..||.|.   |||.|.     ...||:.| :.|:|..:.    :|:||.:.|:.|:::.|
pombe   375 NKSVLYFACYLC---SVGVYT-----GAGLNVTW-LSANIAPHY----KRATAISLQLAIANSSG 426

  Fly   475 D-AGS------PYLVGAISEAI 489
            . ||.      .|:.|.::..|
pombe   427 ILAGQIYRYPPKYIAGHLTSLI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 92/445 (21%)
MFS_1 120..462 CDD:284993 83/408 (20%)
SPAC1002.16cNP_593504.1 MFS 63..455 CDD:119392 93/444 (21%)
2A0114 65..435 CDD:273326 90/427 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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