DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and SPAC1039.04

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_594995.1 Gene:SPAC1039.04 / 2542960 PomBaseID:SPAC1039.04 Length:507 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:86/454 - (18%)
Similarity:178/454 - (39%) Gaps:132/454 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VLCFVNLINYMDRFTIAGVLTDVRNDFDIG--NDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPW 181
            :|..:.|.|.:|:..::...|: ..|.|:|  .|...::.::|.|.:::||..|.||..|:....
pombe    64 LLALLYLFNALDKSNVSNAKTN-GMDKDLGFVGDQYNIMISIFYIPFVLCAFPFSYLYKRFGAAR 127

  Fly   182 IMAVGVGLWSTTTLLGSFMKQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKM---LAL 243
            |:...:..:...:|..:.:|.||..:|.|..:|:.|   |.:.|.::..|.....|:::   ||:
pombe   128 ILPFFMLSFGAMSLCQAAVKNFGGMMAVRWFLGMAE---SAVLPGVVYYLTTFYRRTELARRLAI 189

  Fly   244 FYFAIPVGSGLGYIVGSKTAHL----ANDWRWALRV---TPILGIVAVFLILLIKDPVRGHSEGS 301
            ||.|..|.|..|.::.....|:    ...|::...:   ...|..:.:||:|    ||       
pombe   190 FYAAANVSSAFGGLLAYGVFHIKGGKLQGWQYLFLIEGGVTFLCAIVIFLVL----PV------- 243

  Fly   302 HNLEATTYKQD-IKALVRNRSFMLSTAGFTCVAFVAGALAWWGPSFIYLGMKMQPGNENIVQDDV 365
             ::|...:..| .|.|.:                                |:::..:.:.:.:.:
pombe   244 -SVETANFLTDEEKTLAK--------------------------------MRIENDSSSAISEKL 275

  Fly   366 AFN---------FGVITMLAGL-LGVPLGSFLSQYLVKRYPTADPVICAFG-------LLVSAPL 413
            :|.         ..::.:|..: |||||.| ::.:|.:       ::.|.|       |:..||.
pombe   276 SFKQSLTVFKHPIAILWLLEEMALGVPLNS-INNWLPQ-------IVAAMGFSSVNTNLMTVAPA 332

  Fly   414 LTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILL---YVVVPTRRSTAEAFQI-----LIS 470
            ::||..|          |:|          |.::|.|.   .|::....:|...|.:     :::
pombe   333 ISGAIWL----------LVF----------AFISDFLKNRGIVLIAAISTTMIGFIVYGSIDIMN 377

  Fly   471 HALGDAGSPYL------VGAISEAIMK---HLHKNPSDSGLTTELRSMSQVAGSAISNATQVIA 525
            |    .|..|.      .||.:.:::.   :.:..|::|     .|::....|..::|...:::
pombe   378 H----IGVSYFACFLMTAGAAASSVLTSTWYNNNTPNES-----RRAVFTSVGVPLANVMGLVS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 81/413 (20%)
MFS_1 120..462 CDD:284993 74/374 (20%)
SPAC1039.04NP_594995.1 MFS 71..471 CDD:119392 84/447 (19%)
2A0114 71..463 CDD:273326 84/447 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3710
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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