DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and SPOM_SPAC1039.04

DIOPT Version :10

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_594995.1 Gene:SPOM_SPAC1039.04 / 2542960 PomBaseID:SPAC1039.04 Length:507 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:86/454 - (18%)
Similarity:178/454 - (39%) Gaps:132/454 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VLCFVNLINYMDRFTIAGVLTDVRNDFDIG--NDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPW 181
            :|..:.|.|.:|:..::...|: ..|.|:|  .|...::.::|.|.:::||..|.||..|:....
pombe    64 LLALLYLFNALDKSNVSNAKTN-GMDKDLGFVGDQYNIMISIFYIPFVLCAFPFSYLYKRFGAAR 127

  Fly   182 IMAVGVGLWSTTTLLGSFMKQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKM---LAL 243
            |:...:..:...:|..:.:|.||..:|.|..:|:.|   |.:.|.::..|.....|:::   ||:
pombe   128 ILPFFMLSFGAMSLCQAAVKNFGGMMAVRWFLGMAE---SAVLPGVVYYLTTFYRRTELARRLAI 189

  Fly   244 FYFAIPVGSGLGYIVGSKTAHL----ANDWRWALRV---TPILGIVAVFLILLIKDPVRGHSEGS 301
            ||.|..|.|..|.::.....|:    ...|::...:   ...|..:.:||:|    ||       
pombe   190 FYAAANVSSAFGGLLAYGVFHIKGGKLQGWQYLFLIEGGVTFLCAIVIFLVL----PV------- 243

  Fly   302 HNLEATTYKQD-IKALVRNRSFMLSTAGFTCVAFVAGALAWWGPSFIYLGMKMQPGNENIVQDDV 365
             ::|...:..| .|.|.:                                |:::..:.:.:.:.:
pombe   244 -SVETANFLTDEEKTLAK--------------------------------MRIENDSSSAISEKL 275

  Fly   366 AFN---------FGVITMLAGL-LGVPLGSFLSQYLVKRYPTADPVICAFG-------LLVSAPL 413
            :|.         ..::.:|..: |||||.| ::.:|.:       ::.|.|       |:..||.
pombe   276 SFKQSLTVFKHPIAILWLLEEMALGVPLNS-INNWLPQ-------IVAAMGFSSVNTNLMTVAPA 332

  Fly   414 LTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILL---YVVVPTRRSTAEAFQI-----LIS 470
            ::||..|          |:|          |.::|.|.   .|::....:|...|.:     :::
pombe   333 ISGAIWL----------LVF----------AFISDFLKNRGIVLIAAISTTMIGFIVYGSIDIMN 377

  Fly   471 HALGDAGSPYL------VGAISEAIMK---HLHKNPSDSGLTTELRSMSQVAGSAISNATQVIA 525
            |    .|..|.      .||.:.:::.   :.:..|::|     .|::....|..::|...:::
pombe   378 H----IGVSYFACFLMTAGAAASSVLTSTWYNNNTPNES-----RRAVFTSVGVPLANVMGLVS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS_spinster_like 117..571 CDD:340886 86/454 (19%)
SPOM_SPAC1039.04NP_594995.1 MFS_FEN2_like 56..463 CDD:340885 86/454 (19%)

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