DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and SPBC530.02

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_595315.1 Gene:SPBC530.02 / 2540897 PomBaseID:SPBC530.02 Length:541 Species:Schizosaccharomyces pombe


Alignment Length:477 Identity:86/477 - (18%)
Similarity:154/477 - (32%) Gaps:139/477 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 QWFTVTVLCFVNLINYMDRFTIAGVLTDVRNDFDIGNDSAGLLQTVFVISY----MVCAPIFGYL 173
            :|..|..:..:..:........:..:.:|..||.:....:.|...||::.:    :..||:.|..
pombe    98 KWIVVVQISLIAFVVTFGSSVYSSGIGNVSMDFGVSISVSSLGSCVFLVGFGFGSLPFAPLSGIY 162

  Fly   174 GDRYSRPWIMAVGVGLWSTTTLLGSFMKQFGW-FIAFRALVG-IGEASYSTIAPTIISDLFVHDM 236
            |     .:::.....|..|...:|....|..| .:..|...| .|....|....| :||||....
pombe   163 G-----RFVVYFCTLLMFTLFQIGGGCAQNIWTLVILRFFQGFFGSTPLSNCGGT-LSDLFTPIQ 221

  Fly   237 RSKML---ALFYFAIPVGSGLGYIVGSKTAHLANDWRWALRVTPILGIVAVFLILLIKDPVRGHS 298
            |:.:|   ..|.|..|:   .|.|:|.........|.|...:..|:|.|.:.:|........|.:
pombe   222 RTYVLPGFCTFPFLGPI---FGPIIGDFICQSYLGWCWVFWINMIMGAVVIVIIFFFMPETHGDT 283

  Fly   299 ----------------------EGSHNLEATTYK--QDIKALVRNRSFMLSTAGFTCVAFVAGAL 339
                                  |...|..:..|:  .|..:|:.....::....:..|.::.|.:
pombe   284 ILDYKARYLRNKTRNMKWHTIHERQRNPRSAIYQACTDSVSLLITEPIVVCFTLYLTVVYIIGYI 348

  Fly   340 AWWGPSFIYLGMKMQPGNENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQYLVKRYPTADPVICA 404
            .:.|...::.......|       ::..:|         :|:.:|.                   
pombe   349 DFEGYPIVFAKYSFDQG-------EIGLSF---------IGIGIGI------------------- 378

  Fly   405 FGLLVSAPLLTGAC---LLVNSNSVGT------------YALIFFGQLALNLN-----WA----- 444
                    :|.|||   :.|:.|.|.|            |.| |||.:.|.::     |.     
pombe   379 --------VLAGACTPIIYVHYNRVYTRRNGVMSPEDRLYPL-FFGSIMLPISMFWFAWTCYPYH 434

  Fly   445 --------IVADI-----LLYVVVPTRRSTAEAFQILISHALGDA--------GSPYLVGAISEA 488
                    :::.|     ||:|...:.....:::|.|.:.||..|        |...|||     
pombe   435 PYVHWIVPLISSIFFGWSLLFVFFVSYNYIIDSYQKLAASALAAATLVRYAASGGMSLVG----- 494

  Fly   489 IMKHLHKNPSDSGLTTELRSMS 510
              :.::.|..|...|:.|..:|
pombe   495 --RPMYVNLGDHWATSLLGFIS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 80/450 (18%)
MFS_1 120..462 CDD:284993 70/412 (17%)
SPBC530.02NP_595315.1 MFS_1 105..461 CDD:284993 70/408 (17%)
2_A_01_02 143..279 CDD:273318 34/144 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X211
TreeFam 00.000 Not matched by this tool.
11.000

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