DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and spin-3

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_510181.3 Gene:spin-3 / 184219 WormBaseID:WBGene00008598 Length:483 Species:Caenorhabditis elegans


Alignment Length:465 Identity:168/465 - (36%)
Similarity:265/465 - (56%) Gaps:34/465 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RSQWFTVTVLCFVNLINYMDRFTIAGVLTDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGD 175
            |..:.::.:|..|||||.:||:||||||.||::.::|.:...|::||||:||:|:.:||.|||||
 Worm     5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPICGYLGD 69

  Fly   176 RYSRPWIMAVGVGLWSTTTLLGSFMKQ--FGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRS 238
            |::|.::|.||:.:|.......:|:.:  |..|:.||:|||||||||..|.||:|||:|..|.|:
 Worm    70 RFNRKYVMLVGIVIWLICVCASTFIPRNLFPLFLFFRSLVGIGEASYVNICPTMISDMFTSDKRT 134

  Fly   239 KMLALFYFAIPVGSGLGYIVGSKTAHLANDWRWALRVTPILGIVAVF-LILLIKDPVRGHSEGSH 302
            ::..|||.|:|||||||||:.|..:.|...|:|.:|||.|.||||:. |:.::.:|.||.:|   
 Worm   135 RVYMLFYLAVPVGSGLGYIISSNVSSLTGSWQWGVRVTGIGGIVALLALLFMVHEPERGAAE--- 196

  Fly   303 NLE--------ATTYKQDIKALVRNRSFMLSTAGFTCVAFVAGALAWWGPSFIYLGMKMQPGNEN 359
            .||        :|:|.:|:|.|::..:::::|..:|.:.||:|.|.||.|:.|........|.::
 Worm   197 KLEGKDTTVRPSTSYWKDLKVLLKCPTYVVTTLAYTALIFVSGTLTWWMPTIIEYSAAWTRGYKS 261

  Fly   360 IVQDDVAFN------FGVITMLAGLLGVPLGSFLSQYLV-------KRYPTADPVICAFGLLVSA 411
            |.:..::|.      ||::|...|::|..||:.|:|..:       .:...|..|....|.|:|.
 Worm   262 IKELPLSFKNETGLIFGLLTTACGIIGTLLGNLLAQCFLYGWLGAWSKTKRAHLVAAGCGALIST 326

  Fly   412 PLLTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILLYVVVPTRRSTAEAFQILISHALGDA 476
            |.|....:..:|:.:.|:.::......|..||::..::...:|.|.|||||.::..||||..|||
 Worm   327 PCLVVVFVFGHSSELLTWIMVGVSITGLCFNWSLNVEVFNQIVAPERRSTAFSYVTLISHLCGDA 391

  Fly   477 GSPYLVGAISEAIMKHLHKNPSDSGLTTELRSMSQVAGSAISNATQVIA------EATTSLMETA 535
            ..||::||||:||..:...:|.....:....||.......||.....:|      :|...:.|..
 Worm   392 SGPYIIGAISDAIKSNHLDSPEWDYKSLAYASMLAPVMMGISTVLYFVAAIIFKRDARRLVREMT 456

  Fly   536 RS-SASQEYS 544
            |: |..||.|
 Worm   457 RNESDDQEKS 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 152/395 (38%)
MFS_1 120..462 CDD:284993 137/365 (38%)
spin-3NP_510181.3 MFS_spinster_like 13..438 CDD:340886 159/427 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157646
Domainoid 1 1.000 279 1.000 Domainoid score I894
eggNOG 1 0.900 - - E2759_KOG1330
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41530
Inparanoid 1 1.050 315 1.000 Inparanoid score I1528
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56526
OrthoDB 1 1.010 - - D360635at33208
OrthoFinder 1 1.000 - - FOG0000708
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101629
Panther 1 1.100 - - O PTHR23505
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X211
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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