DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and C42C1.19

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001255630.1 Gene:C42C1.19 / 183402 WormBaseID:WBGene00302978 Length:403 Species:Caenorhabditis elegans


Alignment Length:397 Identity:80/397 - (20%)
Similarity:150/397 - (37%) Gaps:72/397 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VLCFVNLINYMDRFTIAGVLTDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIM 183
            |.|.........|..|| .|:.:|.:..|.||..|.:.::...::.|...:||...||.|...::
 Worm    14 VFCIYVAYVLFRRLPIA-FLSQIRTEIQISNDDIGRIVSIHASAFTVSKLVFGTAADRTSNSRLL 77

  Fly   184 AVGVGLWSTTTLLGSFMKQFGWFIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAI 248
            ..|:.|.||:::..:|..:........|::|..:.:....|..:|:..|.....:.|.::     
 Worm    78 IGGILLCSTSSIGLAFTSEVWQIEVVMAMIGSVQGAGWVPATKLIATWFDDASYATMFSV----- 137

  Fly   249 PVGSG---LGYIVG-SKTAHLANDWRWALRVTPILGIVAVFLILLIKDPVRGHSEGSHNLEATTY 309
             :|.|   .|.||. .||::    ||   .:....|||.:...::.|..:         :.....
 Worm   138 -LGCGSTFAGMIVPLFKTSY----WR---TIEFNSGIVMLLFAIICKKWI---------ITEDAI 185

  Fly   310 KQDIKALVRNRSFMLSTAGFTCVAFVAGALAW------------------WGPSFIYLGMKMQPG 356
            ::::|.|.:......:|.|...:  :..::.|                  |.|  :||       
 Worm   186 RKEVKPLKKEDMEEENTIGVKKI--MKSSVMWHIALVYFFSMEMRTICETWAP--LYL------- 239

  Fly   357 NENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQYLVKRYPTADPVICAFGLLVSAPLLTGAC--- 418
            ||..:..|   .|..:..|.||.|..:...:.:.|..:. ..||.....|::.:..::...|   
 Worm   240 NEKKMSAD---GFQFLYELGGLAGTMISGLVLERLAGKM-GVDPSRRLLGIIFTVIMMIVGCGVF 300

  Fly   419 LLVNSNSVGTYALIFFGQLALNLNWAIVADILLYVVVPTRRSTAEAFQILISHALGD--AGSP-- 479
            .....:||..:...||...::|: |.::..   .....:...|..||...|: ::|.  ||||  
 Worm   301 KFEEYSSVLGFLTGFFVNGSINI-WCLIGS---QAGTKSVAGTVSAFISFIA-SVGSIFAGSPLA 360

  Fly   480 YLVGAIS 486
            :|:...|
 Worm   361 HLIATFS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 80/397 (20%)
MFS_1 120..462 CDD:284993 68/366 (19%)
C42C1.19NP_001255630.1 MFS_OPA_SLC37 7..389 CDD:340870 80/397 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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