DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and T10C6.6

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001368109.1 Gene:T10C6.6 / 180070 WormBaseID:WBGene00011688 Length:465 Species:Caenorhabditis elegans


Alignment Length:461 Identity:100/461 - (21%)
Similarity:179/461 - (38%) Gaps:131/461 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VTVLCFVNL-INYMDRFTIAGVLTDVRNDFDIGNDSA---------------GLLQTVFVISYMV 165
            |.|:.||:. :.:..|..::||.:.::.|: :.|.|.               |.|..:|:.:|..
 Worm    12 VFVVTFVSYGLYHASRKALSGVKSSIKADW-LSNSSGHAPLFTNEADAKHFLGSLDAIFMAAYAA 75

  Fly   166 CAPIFGYLGDRYSRPWIMAVG-VGLWSTTTLLGSFMKQFGW---------FIAFRALVGIGEASY 220
            ....:|:||||.:...::|.| ||...|.||.|:..|.|.:         ::||..:...|..  
 Worm    76 ALFFWGWLGDRLNPKLVVAAGMVGSAVTLTLFGAIPKWFNFYHAPYYIMTYVAFGLVQACGWP-- 138

  Fly   221 STIAPTIISDLFVHDMRSKMLALFYFAIPVGSGLGYIVGSKTAHLANDWRWALRVTPILGIVAVF 285
            |.||  |:::.|....|..::.::....|||:..|.|..:....|...:.:... :.::.:.|:.
 Worm   139 SEIA--IMANWFGKGNRGFVMGVWAACQPVGNIFGSIFTAMVLPLGYQYTFVFN-SVLIALGAIV 200

  Fly   286 LILLI-KDPVRGHSEGSHNLEATTYKQDIKALVRNRS-------------------------FML 324
            :::.| ..|...|.:|   :||..    |:.|.|:.|                         :.:
 Worm   201 VVMAIDSSPNEEHEDG---VEANR----IRLLRRSSSSEPHHNFHGEPISLFKAVLLPGVLAYCI 258

  Fly   325 STAGFTCVAFVAGALAWWGPSFIYLGMKMQPGNENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQ 389
            ..|   |:..|..|..:|.|  :||............|..:.::||      |::|..||.:::.
 Worm   259 CNA---CLKLVNYAFFFWLP--LYLTDAYHWEESQADQLSIWYDFG------GIIGSVLGGYITD 312

  Fly   390 YLVKRYPTADPVICAFGLLVSAPLLTGACLLVNSNSVGTYALIFFGQLALNLNWAIVADILLYVV 454
            .:.||.|           |:.|.|:   |      |:|  :|.|:..:..::.|..|....:.|.
 Worm   313 KMGKRSP-----------LIVAMLV---C------SIG--SLYFYAHVGPHMFWNAVVMTTVGVT 355

  Fly   455 VPTRRSTAEAFQILISHALGDAGSPY--LVGAISEAIMKHLHKNPSDSGLTTELRSMSQV----- 512
            |                     ..||  :||:||    ..|...|:.:|.|..:.::|.:     
 Worm   356 V---------------------SGPYNLIVGSIS----IDLGSQPALAGNTQAMSTVSGLLDGTG 395

  Fly   513 -AGSAI 517
             ||||:
 Worm   396 SAGSAV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 91/425 (21%)
MFS_1 120..462 CDD:284993 83/393 (21%)
T10C6.6NP_001368109.1 MFS_SLC37A3 9..437 CDD:340900 100/461 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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