DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spin and Y39E4B.5

DIOPT Version :10

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_499720.1 Gene:Y39E4B.5 / 176735 WormBaseID:WBGene00012716 Length:505 Species:Caenorhabditis elegans


Alignment Length:435 Identity:81/435 - (18%)
Similarity:150/435 - (34%) Gaps:153/435 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 QWFTVTVL----CFVNLINYMDRFTIAGVLTDVR----------------NDFDIGNDSAGLLQT 157
            :|.|:.::    ....:.|:...||.:.|.|.|.                :|    .::..|.|:
 Worm     2 RWQTIRLISIYAALSAITNFPSGFTNSSVNTAVEKLHKFIATSLRQPGVPDD----ENTIALFQS 62

  Fly   158 VFVISYMVCAPIFG-----YLGDRYSRPWIMAVGVGLWSTTTLLGSFMKQFGWFIAFRALVG--I 215
            ..:..:.| |.|||     .:.|.|.|.:...|.|    |||:..:|::.|.  |.|....|  :
 Worm    63 ATLNCWFV-AQIFGAIMTPMISDGYGRKFGYIVCV----TTTIFATFVQYFS--ICFYMPWGLIL 120

  Fly   216 GEASYSTIAPTIISD----LFVHDMRS-KMLALFYFAIPVGSG----LGYIVGSKTAHLANDWRW 271
            |.:..:.::|  :.|    |:|.:... ::..:..|...:|.|    ||.::|.|:         
 Worm   121 GRSLTALVSP--LGDACLLLYVQETSPLEIRGMSSFLCEIGYGTMCVLGMVLGMKS--------- 174

  Fly   272 ALRVTPILG--------------------IVAV-----FLILLIKDPVRG-------HSEGSHNL 304
                  :||                    ||.:     ||:::..|..:.       ..|.|.|.
 Worm   175 ------VLGESLSRLLLLSLIPLFCSLCFIVRIPETPKFLMIMRNDREKALKSLEFFQGESSDNA 233

  Fly   305 EATTYKQDIK---ALVRNRSFM---------------LSTAGFTCVAFVAGALAWWGPSFIYLGM 351
            ...:..|..|   .|.::.:|:               |:|...|.             ||..:  
 Worm   234 YIMSEYQAEKMTDKLSQDSTFVDLLSKWHLRQAMRLALATLSLTL-------------SFYPI-- 283

  Fly   352 KMQPGNENIVQDDVAFNFGVITMLAGLLGVPLGSFLSQYLVKRYPTADPVICAFGLLVSAPLLTG 416
             :|.....:::..|:.:...|......:.:.|.|.....::.|: :...::..||:|.:.     
 Worm   284 -LQSSTYFLLESGVSVDMAQICSTMAQVVLTLSSICGASIIDRF-SRRKLLITFGILSNV----- 341

  Fly   417 ACLLVNSNSVGTYALIFFGQLALNL----NW---AIVADILLYVV 454
              |||        |..||..|:..:    :|   |.:|.:|.|.:
 Worm   342 --LLV--------AFSFFSHLSATVVSPYSWPKYACLASLLAYCI 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS_spinster_like 117..571 CDD:340886 79/431 (18%)
Y39E4B.5NP_499720.1 MFS 13..458 CDD:475125 79/424 (19%)

Return to query results.
Submit another query.