DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and Spns2

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_038940916.1 Gene:Spns2 / 100270678 RGDID:2303312 Length:757 Species:Rattus norvegicus


Alignment Length:606 Identity:228/606 - (37%)
Similarity:318/606 - (52%) Gaps:117/606 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GSSGSSSSEEGGSREDVANLS------PLGLPTTYSSQQLMPSDTDSMEEERHRLRPHHHHHHPL 87
            |.:|..|::     |:|..||      |.|||:       :||                      
  Rat    46 GGAGVVSAD-----EEVQTLSGSVRRVPSGLPS-------IPS---------------------- 76

  Fly    88 GEHHHIPGIPPSAVVPS----RLSSVGRSQWFTVTVLCFVNLINYMDRFTIAGVLTDVRNDFDIG 148
                 .||...:|..|.    :.:|:||.:.....:|...|::||:||:|:||||.|::..|.:.
  Rat    77 -----TPGCAAAAKGPGAPQPKPASLGRGRGAAAAILSLGNVLNYLDRYTVAGVLLDIQQHFGVK 136

  Fly   149 NDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLGSFM-KQFGWFIAF-RA 211
            :..|||||:||:.|:||.||||||||||::|..|::.|:..||..|...||: :|:.|.:.. |.
  Rat   137 DRGAGLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCGIFFWSAVTFSSSFIPQQYFWLLVLSRG 201

  Fly   212 LVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPVGSGLGYIVGSKTAHLANDWRWALRVT 276
            |||||||||||||||||.|||..:.|:.||::||||||:|||||||.||.....|.||.|||||:
  Rat   202 LVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQAAGDWHWALRVS 266

  Fly   277 PILGIVAVFLIL-LIKDPVRGHSE--GSHNLEATTYKQDIKALVRNRSFMLSTAGFTCVAFVAGA 338
            |:||::...||| |:....|||::  |......|::.:|:|||:||||::.|:...:.|:|..||
  Rat   267 PVLGMITGTLILILVPATKRGHADQLGGQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGA 331

  Fly   339 LAWWGPSFIYLGMKMQPGNENI------VQDDVAFNFGVITMLAGLLGVPLGSFLSQYLVKRYPT 397
            |..|.|.:::....:|...|..      .:|.:.  ||.||...|.|||..|:..:::...|...
  Rat   332 LGMWIPLYLHRAQVVQKTAETCNSPPCGAKDSLI--FGAITCFTGFLGVVTGAGATRWCRLRTQR 394

  Fly   398 ADPVICAFGLLVSAPLLTGACLL---VNSNSVGTYALIFFGQLALNLNWAIVADILLYVVVPTRR 459
            |||::||.|:|.||..:   ||:   ..::.||.|..||.|:..|..||||.||||:|||:||||
  Rat   395 ADPLVCAVGMLGSAIFI---CLIFVAAKTSIVGAYICIFVGETLLFSNWAITADILMYVVIPTRR 456

  Fly   460 STAEAFQILISHALGDAGSPYLVGAISEAIMKHLHKNPSDSGLTTELRSMSQVAGSAISNATQVI 524
            :||.|.|...||.|||||||||:|.||:.|.:                                 
  Rat   457 ATAVALQSFTSHLLGDAGSPYLIGFISDLIRQ--------------------------------- 488

  Fly   525 AEATTSLMETARSSASQEYSDVEQFEGLQYALFSTSFVEVLGGIFFIFTACFIIKDKYNA-TRGL 588
                           |.:.|.:.:|..|.|||....||.||||:||:.||.|.:.|:..| .:..
  Rat   489 ---------------STKDSPLWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQQAF 538

  Fly   589 QGDQGAQAVRSSVALASGQKD 609
            ....||..|.:....::|..|
  Rat   539 PPPPGADEVPAQRLRSTGPSD 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 182/385 (47%)
MFS_1 120..462 CDD:284993 164/355 (46%)
Spns2XP_038940916.1 MFS_spinster_like 106..520 CDD:340886 197/466 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337295
Domainoid 1 1.000 355 1.000 Domainoid score I959
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 422 1.000 Inparanoid score I1724
OMA 1 1.010 - - QHG56526
OrthoDB 1 1.010 - - D360635at33208
OrthoFinder 1 1.000 - - FOG0000708
OrthoInspector 1 1.000 - - otm45890
orthoMCL 1 0.900 - - OOG6_101629
Panther 1 1.100 - - O PTHR23505
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X211
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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