DRSC/TRiP Functional Genomics Resources

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Protein Alignment spin and spns1

DIOPT Version :9

Sequence 1:NP_524823.1 Gene:spin / 45380 FlyBaseID:FBgn0086676 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_031748339.1 Gene:spns1 / 100127684 XenbaseID:XB-GENE-959720 Length:526 Species:Xenopus tropicalis


Alignment Length:535 Identity:247/535 - (46%)
Similarity:322/535 - (60%) Gaps:83/535 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SMEEERHRLRPHHHHHHPLGEHHHIPGIPPSAVVPSRLSSVGRSQWFTVTVLCF-VNLINYMDRF 132
            |.:||....:.|       |:..|:            |:.:......|:.::.| :||:||||||
 Frog    32 SSDEEEEEGKDH-------GKEAHL------------LTGISYRHSVTIVIILFYINLLNYMDRF 77

  Fly   133 TIAGVLTDVRNDFDIGNDSAGLLQTVFVISYMVCAPIFGYLGDRYSRPWIMAVGVGLWSTTTLLG 197
            |:||||:|::.|:.|.:.::||:||||:.|||..||:||||||||:|..||.:|:..||..|||.
 Frog    78 TVAGVLSDIKEDYHISDSNSGLVQTVFICSYMFLAPVFGYLGDRYNRKLIMCIGISFWSLVTLLS 142

  Fly   198 SFM-KQFGW-FIAFRALVGIGEASYSTIAPTIISDLFVHDMRSKMLALFYFAIPVGSGLGYIVGS 260
            ||: ||:.| |:..|.|||:|||||||||||||:|||:.|.||:||:.||||.|||.|||||.||
 Frog   143 SFVSKQYFWLFLLTRGLVGVGEASYSTIAPTIIADLFLADQRSRMLSFFYFATPVGCGLGYIAGS 207

  Fly   261 KTAHLANDWRWALRVTPILGIVAVFLILLI-KDPVRGHSE--GSHNLEATTYKQDIKALVRNRSF 322
            |....|.||.|||||||.||:|||.|::.: |:|.||..|  ....|..|::..|:|||::|.||
 Frog   208 KVTSTAGDWHWALRVTPGLGLVAVLLLIFVAKEPPRGALERKSDRPLTNTSWFSDVKALLKNPSF 272

  Fly   323 MLSTAGFTCVAFVAGALAWWGPSF-------IYLGMKMQPGNENIVQDDVAFNFGVITMLAGLLG 380
            :|||.|||.||||.||||.|||::       ||   |.:|....|...|.:..||.||.:.|:||
 Frog   273 ILSTFGFTTVAFVTGALALWGPTYLMRSRRVIY---KTEPCQGGICNYDDSMIFGGITCVTGVLG 334

  Fly   381 VPLGSFLSQYLVKRYPTADPVICAFGLLVSAPLLTGACLLVNSNSVGTYALIFFGQLALNLNWAI 445
            |..|..:|:...|..|.|||::||.|::.|||.|..:....:::.|.|||.||.|:..|:||||:
 Frog   335 VLTGVEISKRYRKTNPRADPLVCAVGMISSAPFLYLSLAFADTSLVATYAFIFIGETLLSLNWAL 399

  Fly   446 VADILLYVVVPTRRSTAEAFQILISHALGDAGSPYLVGAISEAIMKHLHKNPSDSGLTTELRSMS 510
            |||||||||:|||||||||.||::||.|||||||||:|.||:.|.|  .|.||   ...::||  
 Frog   400 VADILLYVVIPTRRSTAEALQIVVSHLLGDAGSPYLIGVISDQIQK--GKAPS---FLIQMRS-- 457

  Fly   511 QVAGSAISNATQVIAEATTSLMETARSSASQEYSDVEQFEGLQYALFSTSFVEVLGGIFFIFTAC 575
                                                     |:|||...:||.|:||.||:.||.
 Frog   458 -----------------------------------------LEYALMICAFVGVIGGGFFLATAL 481

  Fly   576 FIIKDKYNATRGLQG 590
            ||.||:..|....||
 Frog   482 FIEKDRKRAELFSQG 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spinNP_524823.1 MFS 117..489 CDD:119392 212/384 (55%)
MFS_1 120..462 CDD:284993 192/354 (54%)
spns1XP_031748339.1 MFS_spinster_like 62..477 CDD:340886 229/465 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 369 1.000 Domainoid score I900
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41530
Inparanoid 1 1.050 425 1.000 Inparanoid score I1728
OMA 1 1.010 - - QHG56526
OrthoDB 1 1.010 - - D360635at33208
OrthoFinder 1 1.000 - - FOG0000708
OrthoInspector 1 1.000 - - otm48978
Panther 1 1.100 - - LDO PTHR23505
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3710
SonicParanoid 1 1.000 - - X211
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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