DRSC/TRiP Functional Genomics Resources

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Protein Alignment fwd and Atr

DIOPT Version :9

Sequence 1:NP_001356971.1 Gene:fwd / 45374 FlyBaseID:FBgn0004373 Length:1682 Species:Drosophila melanogaster
Sequence 2:NP_063917.1 Gene:Atr / 245000 MGIID:108028 Length:2641 Species:Mus musculus


Alignment Length:338 Identity:72/338 - (21%)
Similarity:140/338 - (41%) Gaps:89/338 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1410 SNWRLLSAIVKCGDDLRQELMATQLLQMFKII-------WQEEQVDLWVRPYKIVCLSNDSGLIE 1467
            |:.:....:.|..||||::   .:|::...:|       .:..:.:|.:|.|.::.|:::.|:||
Mouse  2314 SDGKFYIMMCKPKDDLRKD---CRLMEFNSLINKSLRKDAESRRRELHIRTYAVIPLNDECGIIE 2375

  Fly  1468 PILNTVSLHQIKKN---------SNKSLK------------------------------EYFIDE 1493
            .:.||..|..|...         :.|.|:                              |:|:..
Mouse  2376 WVNNTAGLRPILTKIYKEKGVYMTGKELRQCMLPKSAALSEKLKVFQELLLPRHPPVFHEWFLRT 2440

  Fly  1494 YGSPSGESFRRAQKNFVQSCAAYCLISYLLQVKDRHNGNILFHS-DGHIIHIDFGFILSISPKNL 1557
            :..|:  |:..::..:.:|.|...::.|:|.:.|||..||||.| .|..:|:||..:.:   |..
Mouse  2441 FPDPT--SWYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSFTGECVHVDFNCLFN---KGE 2500

  Fly  1558 GFEQS---PFKLTPEFVEVMGGTSSEH-WREFNKLLLVGMMSARKHM---------DRIINFVEI 1609
            .||..   ||:||...|..||...:|. :|...::.|..|...|:.:         |.::.:.:.
Mouse  2501 TFEVPEIVPFRLTHNMVNGMGPMGTEGLFRRACEVTLRLMRDQREPLMSVLKTFLHDPLVEWSKP 2565

  Fly  1610 MRSNAHLPCFKNGCSGTVQNLRKRFHMNLTEQEM-----------------ERKVEQLVQDSL-K 1656
            ::.::..|..:   :|.|.|.:.:.|:...||.:                 |..|..|:|::. :
Mouse  2566 VKGHSKAPLNE---TGEVVNEKAKTHVLDIEQRLQGVIKTRNRVTGLPLSIEGHVHYLIQEATDE 2627

  Fly  1657 SLSTKLYDGYQYY 1669
            :|..::|.|:..|
Mouse  2628 NLLCQMYLGWTPY 2640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwdNP_001356971.1 PI4Kc_III_beta 1385..1674 CDD:270712 72/338 (21%)
AtrNP_063917.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 423..447
HEAT repeat 690..720 CDD:293787
HEAT repeat 729..788 CDD:293787
HEAT 1 799..835
HEAT repeat 802..837 CDD:293787
UME 1119..1225 CDD:214825
HEAT 2 1329..1365
NR_LBD 1529..>1607 CDD:299703
FAT 1771..2092 CDD:280429
TEL1 <2123..2641 CDD:227365 72/338 (21%)
PIKKc_ATR 2290..2564 CDD:270625 57/257 (22%)
FATC 2610..2641 CDD:280430 8/31 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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