Sequence 1: | NP_001356971.1 | Gene: | fwd / 45374 | FlyBaseID: | FBgn0004373 | Length: | 1682 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005255239.1 | Gene: | SMG1 / 23049 | HGNCID: | 30045 | Length: | 3689 | Species: | Homo sapiens |
Alignment Length: | 2042 | Identity: | 358/2042 - (17%) |
---|---|---|---|
Similarity: | 632/2042 - (30%) | Gaps: | 706/2042 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 PNNCYQ-----YLRHIREIDTNNKLLSPVVVVAEERPVSKAG------------SPSTVATMATG 82
Fly 83 VDVV--------------------DHCLPTTVRLSVTEALSDLNMNGKAVEPPVTPCTS------ 121
Fly 122 ---VG-----DNANLEVAE---TWA-------------------------CPPPQA-TDDEDISE 149
Fly 150 HSTAACTSTSSSSEHSNST----------------VVHSPTVGESTCDSVSVSVSHPSPSVSQNN 198
Fly 199 TSSATGRMS---SPHSQSSLSIACEPHSASTTTLSSL-------GSD------------LGNGNG 241
Fly 242 STVPAFLM-------------AAPVTL------PIGGQMPTIKCLPG--ASSAASTPKHSRYSKP 285
Fly 286 RLSLSRVFNHSMPSVHGRPNLSL----------------APAGVPGSV-NPPKRISTH------- 326
Fly 327 ----QRNLSLDFRSMGILLPPVSQVTNNH-------INHTQHHRNRSLDSALQRIPEV--EVSSP 378
Fly 379 NAESENTFCSPSILGATM--CSKIATTA------ATVTSALSPPGTPTPALMSTACTPTIGAVKG 435
Fly 436 NVQHPVPKHEQSI-SLAAACRSSAVVESCPTLRMRPKSSESVAANGQEMIGVIVSSTGNGSSSSN 499
Fly 500 NSCSSAGSTKKRED-LTSLGSDDSGIICGSESDQISLNRICHSHESLDSGEMDADADAEEECVDL 563
Fly 564 MDTTSIDEEYNIMQPDHLCLYPPQAASTELDCRTLRPSRKQKRQQQQVLERKNLPSQNQIESEDS 628
Fly 629 VDAGVDARTRYRVMNMSQAAINVELGTASNEIDPDVNYRE---------SHQDPIADAP-SLSTP 683
Fly 684 SVASTASATPSVTPTPIATPTPTESTKNDQV--------LFKNFFGATKNAIFRTAQSIIE--NH 738
Fly 739 EKKNAAKQKEQPDHSGTVSLVGSPNGGSSVPQDLVKSPTDISKKKEFFS----LLTSSSSIKAAA 799
Fly 800 AAAANSAASTPPATPTEALAANSNSKLQPLSDPSADLKVKERTLNLRLPGDSEG-----SEGALT 859
Fly 860 KCSSINSIHKLKLPVPGVVKYFISEKAPVSDVLQKPEKGQ------------SGLLRFFESPVFN 912
Fly 913 --------------IHFAV----------HYLFYSKEPGVLSF----------IGNKIFSFPDQ- 942
Fly 943 -----------EVDLYIPQLVV------MYIQMDEL----AEVLDPYLTIRCRKSVD-------- 978
Fly 979 -----FSLKCLWL-----------LEAYNYQVDSLGNSHNSSRKSKLALMKEIFSKREHKQTQND 1027
Fly 1028 LKSAGTGGLHVGEPRSVVALAKKTHHRSQS-DATVLLADFRSPHTLSISH----RMYQQPPYTTQ 1087
Fly 1088 TLPTTPAK------------------------LC---------------LGDLT-------SGHA 1106
Fly 1107 FDNGCTCFETVRGQVNG---LLGQRTLCSCGAPKTS--PQKEFMKALMNVGK--------NLTSW 1158
Fly 1159 PSKAEKTSALRMSLNLINKNLPARVWLPLY---------------SDIPHHVVRI-------TEE 1201
Fly 1202 KTAVLNSKDKT---PYIIYVEVVEIPDIYTSPLIPKMMPSLRHTK-SEEHLDGSCLNSHQHLSCS 1262
Fly 1263 RTSSCSSSQQGTSC------------RRKKGADVDGGCGDAGPHNSCSNVHSLGGLQFQEDDVW- 1314
Fly 1315 -SQEEDEITAQYLNMRKVSERDTISQISLDS----------------CDSRDQGPPVVF-NIGDV 1361
Fly 1362 RL--RHCSNLSCENTKSFSNDPEDPSAAALKEPWHEKEKLIRESSPYGHLSNWRLL-----SAIV 1419
Fly 1420 KCGDDLRQELMATQLLQMFKIIWQEEQV--------DLWVRPYKIVCLSNDSGL----IEPILNT 1472
Fly 1473 VS-----------LHQIK---------KNSNKSLKEYFIDEYGSPSGESFRRAQKNFVQSCAAYC 1517
Fly 1518 LISYLLQVKDRHNGNILFH-SDGHIIHIDFG-------------------FI--------LSISP 1554
Fly 1555 KNLGF-EQSPFKLTPEFVEVMGGTSSE 1580 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fwd | NP_001356971.1 | PI4Kc_III_beta | 1385..1674 | CDD:270712 | 51/262 (19%) |
SMG1 | XP_005255239.1 | SMG1 | 631..1242 | CDD:292413 | 121/650 (19%) |
PIKKc_SMG1 | 2121..2454 | CDD:270714 | 63/327 (19%) | ||
FATC | 3659..3688 | CDD:280430 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5032 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |