DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fwd and Trrap

DIOPT Version :9

Sequence 1:NP_001356971.1 Gene:fwd / 45374 FlyBaseID:FBgn0004373 Length:1682 Species:Drosophila melanogaster
Sequence 2:XP_006504844.1 Gene:Trrap / 100683 MGIID:2153272 Length:3911 Species:Mus musculus


Alignment Length:1230 Identity:226/1230 - (18%)
Similarity:383/1230 - (31%) Gaps:426/1230 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 EECVDLMDTTSIDEEYNIMQPDHLC--LYPPQAASTELDCRTLR-------------------PS 601
            |.|||            .:|||.|.  :.|.:|...:...||||                   .:
Mouse   851 ELCVD------------NLQPDFLYDHIQPVRAELMQALWRTLRNPADSISHVAYRVLGKFGGSN 903

  Fly   602 RKQKRQQQQV-------------LERKNLPSQNQIESEDSVDAGVD----ART----RYRVMNMS 645
            ||..::.|::             :|..:..:..|:..|.:::..:|    |.|    |.:...:.
Mouse   904 RKMLKESQKLHYVVTEVQGPSITVEFSDCKASLQLPMEKAIETALDCLKSANTEPYYRRQAWEVI 968

  Fly   646 QAAINVELGTASN-----EIDPDVNYRE--------SHQDPIADAPSLSTPSVASTAS------- 690
            :..:...:....|     ::....|:.|        ||:....|.|:..|...|.|.:       
Mouse   969 RCFLVAMMSLEDNKHALYQLLAHPNFTEKTIPNVIISHRYKAQDTPARKTFEQALTGAFMSAVIK 1033

  Fly   691 -ATPSVTP------------------TPIATPTPTESTKNDQVLFKNFFGATKN---AIFRTAQS 733
             ..||..|                  .|...|.....::....:|.:....:|.   .:...|.:
Mouse  1034 DLRPSALPFVASLIRHYTMVAVAQQCGPFLLPCYQVGSQPSTAMFHSEENGSKGMDPLVLIDAIA 1098

  Fly   734 IIENHEKKNAAKQKEQPDHSGTVSL----------VGSPNGGSSVP--QDLVKSPTDISKKKEFF 786
            |...:|:|...|       .|.|:|          :||......:|  ..:|:.......::.::
Mouse  1099 ICMAYEEKELCK-------IGEVALAVIFDVASIILGSKERACQLPLFSYIVERLCACCYEQAWY 1156

  Fly   787 SLLTSSSSIK---------------------------AAAAAAANSAASTPPATPTEALAANSNS 824
            :.|....|||                           ......:|.|.:....|..:.|...:. 
Mouse  1157 AKLGGVVSIKFLMERLPLTWVLQNQQTFLKALLFVMMDLTGEVSNGAVAMAKTTLEQLLMRCAT- 1220

  Fly   825 KLQPLSDPSADLKVKERTLNLRLPGDS---EGSEGALTKCSSINS------IHKLKL--PVPGVV 878
               ||.|       :||...:.|..:.   ..:...:.:.:|.||      :|.|::  .|.|..
Mouse  1221 ---PLKD-------EERAEEIVLAQEKSFHHVTHDLVREVTSPNSTVRKQAMHSLQVLAQVTGKS 1275

  Fly   879 KYFISEKAPVSDVLQ------------KPEKGQSGLLRFFESPVFNIHFAVHYLFYSKEPGVLSF 931
            ...|.|  |..:|||            :|...|.||:   |...|                 .:.
Mouse  1276 VTVIME--PHKEVLQDMVPPKKHLLRHQPANAQIGLM---EGNTF-----------------CTT 1318

  Fly   932 IGNKIFSFPDQEVDLYIPQLVVMYIQMDELAEVLDPYLT-IRCRKS----VDFSLKCLWLLEAYN 991
            :..::|:     :||.:.:..|.|.::..|.|..|..|| :.|.||    |...:..|..|.|.|
Mouse  1319 LQPRLFT-----MDLNVVEHKVFYTELLNLCEAEDSALTKLPCYKSLPSLVPLRIAALNALAACN 1378

  Fly   992 YQVDSLGNSHNSSRKSKLALMKEIFSKREHKQTQNDLKSAGTGGLHVGEPRSVVALAK-KTHHRS 1055
            |       ...|..|...||.|.:.|      |.::|:.||...:......:.:.:.: .||.| 
Mouse  1379 Y-------LPQSREKIIAALFKALNS------TNSELQEAGEACMRKFLEGATIEVDQIHTHMR- 1429

  Fly  1056 QSDATVLLADFRSPHTLSISHRMYQQPPYTTQTLPTT-PAKLCLGDLTSGHAFDNGCTCFETVRG 1119
              ...::|.|:|| .||::.:|:..    .|:..|.: ..|.|  |....|..........|.:|
Mouse  1430 --PLLMMLGDYRS-LTLNVVNRLTS----VTRLFPNSFNDKFC--DQMMQHLRKWMEVVVITHKG 1485

  Fly  1120 QVNGLLGQR-----TLCSCGAPKTSPQKEFMKALMNVGKNLTSWPSKAEKTSALRMSLNLIN--K 1177
                  |||     :|..||....||..:|..|:..|           |:.......:||.:  .
Mouse  1486 ------GQRSDGNESLSECGRCSLSPFCQFEPAMEGV-----------EEMKICSAIINLFHLIP 1533

  Fly  1178 NLPARVWLPLYSDIPHHVVRITEEKTAV-LNSKDKTPYIIY--------VEVVEIPDIYTSPLIP 1233
            ..|..:..||.     .||..||....: ..|..:.|.|.:        ||:..:......|...
Mouse  1534 AAPQTLVKPLL-----EVVMKTERAMLIEAGSPFREPLIKFLTRHPSQTVELFMMEATLNDPQWS 1593

  Fly  1234 KM-MPSLRHTKSEEHLDGSCLNSHQHLSCSRTSSCSSSQQGTSCRRKKGADVDGGCGDAGPHNSC 1297
            :| |..|:|..:....|....|.::.::..                     :.||...|....|.
Mouse  1594 RMFMSFLKHKDARPLRDVLAANPNRFITLL---------------------LPGGAQTAVRPGSP 1637

  Fly  1298 SNVHSLGGLQFQ----------EDDVWSQEEDEITAQYLNMRKVSERDTISQ------------- 1339
            |..:....||||          .||.|...:..:.:|   :|:|...:|..:             
Mouse  1638 STSNMRLDLQFQAIKIISIIVKNDDAWLASQHSLVSQ---LRRVWVSETFQERHRKENMAATNWK 1699

  Fly  1340 -------ISLDSCDSRDQGPPVVFNIGDVRL----------RHCSNLSC-------ENTKSFS-- 1378
                   ..|:.|..         |.||:.|          |...|::.       |..|::|  
Mouse  1700 EPKLLAFCLLNYCKR---------NYGDIELLFQLLRAFTGRFLCNMTFLKEYMEEEIPKNYSIA 1755

  Fly  1379 ------------NDPEDPSAAALKEPWH-------------EKEKLIRESSPYGHLSNWRLLSAI 1418
                        |||........|...|             |.|:|:...:|.|  .|...::::
Mouse  1756 QKRALFFRFVEFNDPNFGDELKAKVLQHILNPAFLYSFEKGEGEQLLGPPNPEG--DNPESITSV 1818

  Fly  1419 VKCGDDLRQELMATQLLQMFKIIWQEEQVDLWVRPYKIVCLSNDSGLIEPILNTVSLHQIKKNSN 1483
            .                 :.|::..|:|.|: :...:|..|...:.|:|...:  .:|...||.|
Mouse  1819 F-----------------ITKVLDPEKQADM-LDSLRIYLLQYATLLVEHAPH--HIHDNNKNRN 1863

  Fly  1484 KSLKEYFIDEYGSPSGESFRRAQKNFVQSCAAYCLIS-YLLQVKDRHNGNILFHSDGHII 1542
            ..|:.                     :.:.|..||:| ..:....:::|::|.   .|||
Mouse  1864 SKLRR---------------------LMTFAWPCLLSKACVDPACKYSGHLLL---AHII 1899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwdNP_001356971.1 PI4Kc_III_beta 1385..1674 CDD:270712 30/172 (17%)
TrrapXP_006504844.1 TEL1 <2552..3911 CDD:227365
FAT 2868..3211 CDD:367004
PIKK_TRRAP 3522..3835 CDD:270707
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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