DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fwd and pik3c3

DIOPT Version :9

Sequence 1:NP_001356971.1 Gene:fwd / 45374 FlyBaseID:FBgn0004373 Length:1682 Species:Drosophila melanogaster
Sequence 2:XP_031750800.1 Gene:pik3c3 / 100485933 XenbaseID:XB-GENE-6085226 Length:887 Species:Xenopus tropicalis


Alignment Length:601 Identity:148/601 - (24%)
Similarity:248/601 - (41%) Gaps:119/601 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1138 TSPQKE----FMKALMNVGKNLT------SW--PSKAEKTSALRMSLNLINKNLPARVWLPLYSD 1190
            ||.:::    |...|.|..|.||      :|  |.:|      :.:|.|:.|      |.|:..:
 Frog   309 TSEEQDLVWKFRHYLTNQEKALTKFLKCVNWDLPQEA------KQALELLGK------WKPMDVE 361

  Fly  1191 -----IPHHVVRITEEKTAV--LNSKDKTPYIIY-VEVVE------IPDIYT----------SPL 1231
                 :..|....|..:.||  |...|....::| :::|:      ..||.:          .|:
 Frog   362 DSLELLSSHFTNPTVRRYAVARLQQADDEDLLMYLLQLVQALKYENFEDIKSGLEPTKKDSQGPM 426

  Fly  1232 IPKMMPSLRHTKSEEHLDGSCLNSHQHLSCSRTSSCSSSQQGTSCRRKKGADVDGGCGDAGP--- 1293
            :..|..|..:.:|:         |.|.:|....|:.||  ...|.:.|.|.|.:....|...   
 Frog   427 LESMTTSGINPESD---------SSQVISNPLPSAVSS--PAPSSKTKDGLDAENLEQDLCTFLI 480

  Fly  1294 HNSCSNVHSLGGLQFQ-----EDDVWSQEEDEITAQYLN-MRKVSE------------RDTISQ- 1339
            ..:|.|......|.:.     ||......:.:....||| ||:.|:            |..::. 
 Frog   481 SRACKNSTLANYLYWYVIVECEDQDTQLRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLATQ 545

  Fly  1340 -------ISLDSCDSRDQGPPVVFN------IGDVRLRHCSNLSCENTKSFSNDPE------DPS 1385
                   :.|.....|:.|.....|      :||   ....|||.........:|:      .|.
 Frog   546 QTFVDRLVHLMKAVQRESGNRKKKNERLQALLGD---NEKMNLSEFEPIPLPLEPQVKIRGIIPE 607

  Fly  1386 AAALKEPWHEKEKLIRESSPYGHLSNWRLLSAIVKCGDDLRQELMATQLLQMFKIIWQEEQVDLW 1450
            .|.|.:......||..::...|.      ...|.|.||||||:.:..|::.:...:.::|.:||.
 Frog   608 KATLFKSALMPAKLYFKTEDGGR------YPVIFKNGDDLRQDQLILQIISLMDKLLRKENLDLK 666

  Fly  1451 VRPYKIVCLSNDSGLIEPILNTVSLHQI---KKNSNKSLKEYFIDEYGSPSGESFRRAQKNFVQS 1512
            :.|||::..|...|.:: .:.:|.:.::   :.:.....::|...|.| |.|.| ......:|:|
 Frog   667 LTPYKVLATSTKHGFMQ-FIQSVPVAEVLATEGSIQNFFRKYAPSEKG-PYGIS-AEVMDTYVKS 728

  Fly  1513 CAAYCLISYLLQVKDRHNGNILFHSDGHIIHIDFGFILSISPKNLGFEQSPFKLTPEFVEVMGGT 1577
            ||.||:|:|:|.|.|||..|:|....|.:.|||||:||...||.|   ..|.||..|.||.||||
 Frog   729 CAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPL---PPPMKLNKEMVEGMGGT 790

  Fly  1578 SSEHWREFNKLLLVGMMSARKHMDRIINFVEIMRSNAHLPCFKNGCSGTVQNLRKRFHMNLTEQE 1642
            .||.::.|.|......:..|::.:.|:|...:| .:|::|........||:.::.:|.::|:::|
 Frog   791 QSEQYQAFRKQCYTAFLHLRRYSNLILNLFSLM-VDANIPDIALEPDKTVKKVQDKFRLDLSDEE 854

  Fly  1643 MERKVEQLVQDSLKSL 1658
            ....::.|:.||:.:|
 Frog   855 AVHYMQTLIDDSVNAL 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwdNP_001356971.1 PI4Kc_III_beta 1385..1674 CDD:270712 84/277 (30%)
pik3c3XP_031750800.1 C2_PI3K_class_III 26..186 CDD:176042
PI3Ka_III 283..503 CDD:238442 44/216 (20%)
PI3Kc_III 539..883 CDD:270628 96/348 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.