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Protein Alignment Treh and Treh

DIOPT Version :9

Sequence 1:	NP_726025.1	Gene:	Treh / 45368	FlyBaseID:	FBgn0003748	Length:	596	Species:	Drosophila melanogaster
Sequence 2:	NP_067456.1	Gene:	Treh / 58866	MGIID:	1926230	Length:	576	Species:	Mus musculus

Alignment Length:	556	Identity:	240/556 - (43%)
Similarity:	342/556 - (61%)	Gaps:	17/556 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly    44 EEAQDPFASCKIYCEGNLLHTIQTAVPKLFADSKTFVDMKLNNSPDKTLEDFNAMMEAKNQTPSS 108
            :||..|....:|||.|.|||.:|.|  :|:.|.|.||||.|..|||:.|:.|:.:....|.:...
Mouse    18 QEALPPPCESQIYCHGELLHQVQMA--QLYQDDKQFVDMSLATSPDEVLQKFSELATVHNHSIPK 80

  Fly   109 EDLKQFVDKYFSAPGTELEKWTPTDWKENPSFLDLISDPDLKQWGVELNSIWKDLGRKMKDEVSK 173
            |.|::||..:|...|.||:.|||.|||::|.||..|||.:|:.|..||:.|||.||:|||.||..
Mouse    81 EQLQEFVQSHFQPVGQELQSWTPEDWKDSPQFLQKISDANLRVWAEELHKIWKKLGKKMKAEVLS 145

  Fly   174 NPEYYSIIPVPNPVIVPGGRFIEFYYWDSYWIIRGLLYSQMFDTARGMIENFFSIVNRFGFIPNG 238
            .||..|:|...:|.|||||||:|||||||||::.|||.|:|..|.:||::||..:|..:|.||||
Mouse   146 YPERSSLIYSKHPFIVPGGRFVEFYYWDSYWVMEGLLLSEMASTVKGMLQNFLDLVKTYGHIPNG 210

  Fly   239 GRVYYHGRSQPPLLTGMVKSYVDFTNDDKFAIDALDTLEHEFEFFVNNHNVTV----KNHSLCVY 299
            ||:||..||||||||.|:..||..|.|..|..:.:.||..|.:|:..|..|:|    :::.|..|
Mouse   211 GRIYYLQRSQPPLLTLMMDRYVAHTKDVAFLQENIGTLASELDFWTVNRTVSVVSGGQSYVLNRY 275

  Fly   300 RDSSSGPRPESYREDVETGEEFPTDEAKELHYSELKAGAESGMDFSSRWFISPTGTNDGNRSALS 364
            .....||||||||:|.|.....|..: :|..::|||||||||.||||||.:.  |.:....|::.
Mouse   276 YVPYGGPRPESYRKDAELANSVPEGD-RETLWAELKAGAESGWDFSSRWLVG--GPDPDLLSSIR 337

  Fly   365 TTSIVPVDLNAYLYWNAKLIAEFHSKAGNTKKVTEYETKAEKLLLGIQEVLWNEEAGVWLDYDMI 429
            |:.:||.||||:|....:|::.|:|:.||..:.|:|.....:.|..::.|||:|:.|.|.|||:.
Mouse   338 TSKMVPADLNAFLCQAEELMSNFYSRLGNDTEATKYRNLRAQRLAAMEAVLWDEQKGAWFDYDLE 402

  Fly   430 NQKPRDYYTPTNLSPLWVKAFNISESEKISASVMAYIERNKLDSFPGGVPNTLSYTGEQWDAPNV 494
            ..|....:.|:||||||...|:   ...::...:.|:|.:|:.::..|:|.:|..||:|||.||.
Mouse   403 KGKKNLEFYPSNLSPLWAGCFS---DPSVADKALKYLEDSKILTYQYGIPTSLRNTGQQWDFPNA 464

  Fly   495 WAPMQYILVEGLNNLNTPEAKNMSLKWATRWVKTNFAAFSKDRHMYEKYNADEFGVGGGGGEYEV 559
            |||:|.:::.||....:|..:.::.:.|..|:||||..:|:...|:|||:....|..||||||||
Mouse   465 WAPLQDLVIRGLAKSASPRTQEVAFQLAQNWIKTNFKVYSQKSAMFEKYDISNGGHPGGGGEYEV 529

  Fly   560 QTGFGWSNGVIIEWLSKHGRDISIGS-----GCGCL 590
            |.||||:||:.:..|.::|..::.|:     |..||
Mouse   530 QEGFGWTNGLALMLLDRYGDQLTSGTQLASLGPHCL 565

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.