DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Treh and treh

DIOPT Version :9

Sequence 1:NP_726025.1 Gene:Treh / 45368 FlyBaseID:FBgn0003748 Length:596 Species:Drosophila melanogaster
Sequence 2:XP_002935060.3 Gene:treh / 100489256 XenbaseID:XB-GENE-986148 Length:613 Species:Xenopus tropicalis


Alignment Length:589 Identity:251/589 - (42%)
Similarity:366/589 - (62%) Gaps:43/589 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PTISLLL--VSWSCLVALSQAKTYSLPDLTTDYNNAIPVDEEEAQDPFASCKIYCEGNLLHTIQT 67
            |::||:|  .:..||.|       .||.         |.|.:          |||.|:||.|:|.
 Frog    39 PSVSLILHTAALGCLAA-------ELPP---------PCDSQ----------IYCTGDLLQTVQL 77

  Fly    68 AVPKLFADSKTFVDMKLNNSPDKTLEDFNAMMEAKNQTPSSEDLKQFVDKYFSAPGTELEKWTPT 132
            |  |:|.|.|.||||.|.::|::||:.|..:   :::..:.|.|..||:..||.||.|.|.|:|:
 Frog    78 A--KIFEDDKHFVDMVLQDTPERTLQKFQTL---QSEGVTQETLIAFVNSSFSPPGQEFEPWSPS 137

  Fly   133 DWKENPSFLDLISDPDLKQWGVELNSIWKDLGRKMKDEVSKNPEYYSIIPVPNPVIVPGGRFIEF 197
            |||.||..|..|:|.:|:.|..|::::|||||||:|:.|...|::||.|.|||.||||||||:||
 Frog   138 DWKANPQLLSQIADSNLRDWAAEIHALWKDLGRKVKNIVKDQPDHYSQIYVPNAVIVPGGRFLEF 202

  Fly   198 YYWDSYWIIRGLLYSQMFDTARGMIENFFSIVNRFGFIPNGGRVYYHGRSQPPLLTGMVKSYVDF 262
            |||||||:|.|||.|:|.:|||||||||..:|:|||.|||||||||..|||||.||.|:.||:..
 Frog   203 YYWDSYWVINGLLLSEMHNTARGMIENFLYMVDRFGMIPNGGRVYYLRRSQPPFLTLMMDSYMTH 267

  Fly   263 TNDDKFAIDALDTLEHEFEFFVNNHNVTV----KNHSLCVYRDSSSGPRPESYREDVETGEEFPT 323
            ..:..|....:..||.|::|::||.:|||    |::.|..|.....|||||||.:|.|..:....
 Frog   268 QKNMTFLRANIHLLEKEYDFWMNNRSVTVTLGGKSYVLNRYYVPVGGPRPESYSDDYELAQTVAP 332

  Fly   324 DEAKELHYSELKAGAESGMDFSSRWFISPTGTN--DGNRSALSTTSIVPVDLNAYLYWNAKLIAE 386
            ...:.| .:||||.||||.|||||||....|::  |.|.:...|:|:||.|||..|....:.:|:
 Frog   333 ASQQSL-LAELKAAAESGWDFSSRWFSGSLGSSKTDINLNTTRTSSVVPADLNGILCRVERTLAK 396

  Fly   387 FHSKAGNTKKVTEYETKAEKLLLGIQEVLWNEEAGVWLDYDMINQKPRDYYTPTNLSPLWVKAFN 451
            |:.:....:|.::..|...:.|..:|.|||:|:.|:||||:|..|:....:.|:||.|||...::
 Frog   397 FYKELNMPEKASQLHTALTQRLEAVQSVLWDEDLGIWLDYNMDAQRRNTNFYPSNLVPLWAMCYS 461

  Fly   452 ISESEKISASVMAYIERNKLDSFPGGVPNTLSYTGEQWDAPNVWAPMQYILVEGLNNLNTPEAKN 516
               ..|::..|::|::::.:.|:..|:|.:|:.:|:|||.||.|.|:|::::|||....:..|||
 Frog   462 ---DTKVADRVVSYLKKSGVLSYKNGIPTSLTRSGQQWDFPNAWPPLQHMVIEGLAQSESFRAKN 523

  Fly   517 MSLKWATRWVKTNFAAFSKDRHMYEKYNADEFGVGGGGGEYEVQTGFGWSNGVIIEWLSKHGRDI 581
            ::...|..||:||:.|:...:.|:|||:.:..|..|||||||||.||||||||:::.|.::...:
 Frog   524 IAFSLAQNWVRTNYKAYKIYKGMFEKYDVEGDGKPGGGGEYEVQVGFGWSNGVVLQLLERYKTQL 588

  Fly   582 SIGS 585
            :.|:
 Frog   589 TAGT 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrehNP_726025.1 Trehalase 71..577 CDD:279537 230/511 (45%)
trehXP_002935060.3 Trehalase 79..584 CDD:418443 230/511 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 468 1.000 Domainoid score I455
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5198
Inparanoid 1 1.050 486 1.000 Inparanoid score I1411
OMA 1 1.010 - - QHG63425
OrthoDB 1 1.010 - - D167279at33208
OrthoFinder 1 1.000 - - FOG0001723
OrthoInspector 1 1.000 - - otm49311
Panther 1 1.100 - - LDO PTHR23403
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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