DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and AT1G73655

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_565069.4 Gene:AT1G73655 / 843700 AraportID:AT1G73655 Length:234 Species:Arabidopsis thaliana


Alignment Length:175 Identity:44/175 - (25%)
Similarity:61/175 - (34%) Gaps:66/175 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAVPNKARVSVRY-- 110
            |:...:..|||..||         |..|.|  |..|.|             .:||    .:||  
plant    82 SEQMKKSRLDVFQEE---------DNTRGL--EKQEEI-------------ILPN----GIRYYD 118

  Fly   111 ----------SGYWEGETAPFD-SSLLRGSKFVF-ET--GQGT--------------VVEGLEVA 147
                      |||    ...|| ...:.|::.|| :|  |:|.              :.:|:|..
plant   119 LQVGSGATPSSGY----LVVFDVKGQVHGTEQVFVDTFGGKGKSLAMVMDSRPYSKGLCQGIEHV 179

  Fly   148 VRSMRPYEQAEFIISYKLLFG----ELGCPPRIKPKADALFKVEV 188
            :|||:...:...||...|.||    |.|....|.|.|...:.:||
plant   180 LRSMKAGGKRRVIIPPSLGFGDRNVEFGQGLEIPPSATLDYIIEV 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 32/127 (25%)
TPR repeat 218..257 CDD:276809
TPR 230..>389 CDD:440225
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
AT1G73655NP_565069.4 FKBP_C 126..224 CDD:459735 26/101 (26%)
Blue background indicates that the domain is not in the aligned region.

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