DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkbp15a

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_009299868.1 Gene:fkbp15a / 799923 ZFINID:ZDB-GENE-060526-98 Length:875 Species:Danio rerio


Alignment Length:517 Identity:103/517 - (19%)
Similarity:185/517 - (35%) Gaps:157/517 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DSDSDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRTGHVDREAVPNKARVSVR 109
            |..||:..|..||       :|.|   |:.:....::|:....::........::.|:||::..|
Zfish   308 DICSDTLSEGKLD-------TPET---DKSKCAQHDLDQAPDGKVEPKSECQIDSGPSKAKLISR 362

  Fly   110 YS-----------GYWEGETAPFDSSLLRGSKFVFETG--------------------------- 136
            .:           |....:..|.||.....|    |:|                           
Zfish   363 IAKMGQPMLPFLIGAIPAQPDPSDSETEDAS----ESGLTCDPCPSHDSPSPKPAQIPCTSPPSL 423

  Fly   137 -QGTVVEGLEVAVRS-MRPYEQAEFIISYKLLFGELGC------PPRIKPKADALFKVEVIDYS- 192
             |...|:..|.|.:: ..|.:.          |....|      ||::. ...::::.:.|.|| 
Zfish   424 YQADAVQNKEAAPQAESNPAQD----------FQPCSCRENPYFPPQLN-SFTSIYQAQHIPYST 477

  Fly   193 ------LIGDAK--------GIDAIPQE-DRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFE 242
                  |:.||:        .|:.:... ||     :..|..|||..|..|..|     |..:.|
Zfish   478 PDITSFLMSDARQHNKEILMAIEKLEHRVDR-----LTSKVDDLHKEGHFSFGL-----ATVSLE 532

  Fly   243 RAVSSLNYCRMANDEEERKQTELLTTL--NQNLMIVYNKM------NK------PKRACIMMKAL 293
            ..:...|..|:...|....:.|:|::.  .||     :||      ||      |.:.|.:....
Zfish   533 TNMILYNIQRIIQQESVCLKNEVLSSKLEGQN-----HKMEDLCEQNKRYMEQLPIQTCHIHSEQ 592

  Fly   294 RHLTMGNPSCKALFQ-----------EGRALAALGE--YNLARNAYLQAQAKQPANK-EISDEII 344
            ........||:...|           :.:..|||.:  .:.|:.:.|:||..:...| |.||:..
Zfish   593 EKEDSLISSCQLQQQLVNLQQRETEIQTQLSAALDDKHKHCAQISLLEAQVAELLKKEEQSDQRW 657

  Fly   345 SMNKR--------ISKYEEASRDIWARAFSLKNSKSD-VRKTPAQLEK---EAKEQDFNDKMEDL 397
            ...|:        |...:|..:|:.|...:|:...|: .||..|:.|:   |.:|:....:.|.|
Zfish   658 RAEKQKYKELESTIQNMDEEMQDLRAEKENLQQVLSEKKRKWKAERERIIVEQEEEHERSQQEVL 722

  Fly   398 -----IRRFKNTSD---QQVSFSRKSYSNAQFDATCKLAKEHNLKLTLSPIQ---EDVLTLS 448
                 :|:.:::::   :|..|.    .:||.....:||::..|:..::.:|   ||:.|.|
Zfish   723 QLLMQLRKARHSTEALMKQAEFE----LSAQKKCDAELAEQEKLEGAITELQEQCEDLTTTS 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 20/138 (14%)
TPR repeat 218..257 CDD:276809 10/38 (26%)
TPR repeat 262..295 CDD:276809 10/46 (22%)
TPR repeat 304..329 CDD:276809 6/37 (16%)
fkbp15aXP_009299868.1 FKBP_C 192..286 CDD:306713
SMC_N <485..707 CDD:330553 52/236 (22%)
SMC_N <624..874 CDD:330553 39/161 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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