DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbpl

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_063926.1 Gene:Fkbpl / 56299 MGIID:1932127 Length:347 Species:Mus musculus


Alignment Length:380 Identity:89/380 - (23%)
Similarity:139/380 - (36%) Gaps:114/380 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EEN----------FEPYTPQLLKNPLSYSDLVKKGVEFEVDN----SQQNHARDLGLDSDSDSDY 52
            |||          |...:|.||...|      |.||..:..|    :|:......|.:.|||.  
Mouse    21 EENAQQILNTAIPFRQRSPGLLPEAL------KVGVRPDPANQIVETQEIEHPVAGFEGDSDQ-- 77

  Fly    53 EDALDVDGEELRSPWTYSFDELRALMSEI----DENIYKRITRTGH-VDREAVPNKARVSVRYSG 112
               ..|...|:.       :.|:|  |::    |.:..|:|...|| :|:..:.:|.:|..  .|
Mouse    78 ---FQVSTNEMA-------EHLQA--SDLWYCPDGSFVKKIIVPGHGLDKPKLGSKCQVLA--LG 128

  Fly   113 YWEGETAPFDSSLLRG-SKFVFETGQ------GTVVEGLEVAVRSMRPYEQAEFIISYKLLFGEL 170
            :      ||.|.:..| ::.....||      |   |.:|..:.|||..|:|:..:         
Mouse   129 F------PFGSGMPEGWTELTIGIGQWREKMWG---ELMEKCLESMRQGEEAKIHL--------- 175

  Fly   171 GCPPRIKPKADA-LFKVEVIDYSLIGDAKGIDAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRY 234
                   |.:.| |.|:.:..::     .|.|:...|..:|..:    |.:.|..|.:..:.|..
Mouse   176 -------PGSSAPLAKLRLDSFT-----NGRDSWEMEAMEKEAL----AKEEHRRGTELFRAGNP 224

  Fly   235 QSAATAFERAVSSLNYCRMANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMG 299
            |.||..:.||:..|.........|.       |||..||           .||.::  |.|..:.
Mouse   225 QGAARCYGRALRLLLTLPPPGPPER-------TTLYANL-----------AACQLL--LGHPQLA 269

  Fly   300 NPSC-----------KALFQEGRALAALGEYNLARNAYLQAQAKQPANKEISDEI 343
            ..||           |||::.|.|.||||:...|...:.:..|..|.|:...:|:
Mouse   270 AQSCDRVLEREPGHLKALYRRGVARAALGDLEKATADFKKVLAVDPKNRAAKEEL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 22/100 (22%)
TPR repeat 218..257 CDD:276809 10/38 (26%)
TPR repeat 262..295 CDD:276809 8/32 (25%)
TPR repeat 304..329 CDD:276809 10/24 (42%)
FkbplNP_063926.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 2/2 (100%)
TPR_11 208..281 CDD:290150 22/92 (24%)
TPR 1 208..241 10/32 (31%)
TPR repeat 208..236 CDD:276809 9/27 (33%)
TPR repeat 249..279 CDD:276809 11/49 (22%)
TPR 2 250..283 11/45 (24%)
TPR_11 252..315 CDD:290150 20/75 (27%)
TPR 3 284..317 12/32 (38%)
TPR repeat 284..312 CDD:276809 10/27 (37%)
TPR_1 285..317 CDD:278916 12/31 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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