DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkbp1ab

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001005594.1 Gene:fkbp1ab / 449552 ZFINID:ZDB-GENE-040927-9 Length:108 Species:Danio rerio


Alignment Length:96 Identity:31/96 - (32%)
Similarity:43/96 - (44%) Gaps:4/96 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 DREAVPNKARVS-VRYSG-YWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRSMRPYEQAE 158
            |....|.|.:.. |.|.| ..:|.  .||||..|...|.|:.|:..|:.|.|..|..|...::|:
Zfish    12 DGRTFPKKGQTCVVHYVGSLTDGR--KFDSSRDRDKPFKFKIGKQEVIRGWEEGVVQMSVGQRAK 74

  Fly   159 FIISYKLLFGELGCPPRIKPKADALFKVEVI 189
            ...|....:|..|.|..|.|.|..:|.||::
Zfish    75 LTCSPDFAYGNKGHPGIIPPNATLIFDVELL 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 31/94 (33%)
TPR repeat 218..257 CDD:276809
TPR 230..>389 CDD:440225
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
fkbp1abNP_001005594.1 FkpA 3..106 CDD:440311 31/96 (32%)
Blue background indicates that the domain is not in the aligned region.

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