DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbpl

DIOPT Version :10

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001002818.1 Gene:Fkbpl / 406168 RGDID:1303227 Length:347 Species:Rattus norvegicus


Alignment Length:355 Identity:79/355 - (22%)
Similarity:134/355 - (37%) Gaps:95/355 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DNSQQNHARDLGLDSDSDSDYEDALDVD-----------GEELRSP----------WTYSFDELR 75
            :|:|||....:.:...|.....:||:|.           .:|:.:|          :..|.||:.
  Rat    22 ENTQQNLNAAVPIKQQSPGLLPEALEVGVKPDPASQILATQEIENPVAGFEGDSDKFHISTDEMA 86

  Fly    76 ALM--SEI----DENIYKRITRTGH-VDREAVPNKARVSVRYSGYWEGETAPFDSSLLRG-SKFV 132
            ..:  |::    |.:..|:|...|| :|:..:.:|.||..  .|:      ||.|.:..| ::..
  Rat    87 EHLQASDLWYCPDGSFVKKIIVHGHGLDKPKLGSKCRVLA--LGF------PFGSGMPEGWTELT 143

  Fly   133 FETGQ---GTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYSLI 194
            ..|||   .|..|..|..:.|||..|:|:.               .:...:..|.|:.:..::..
  Rat   144 IGTGQWREKTWGELTEKCLESMRQGEEAKI---------------HLPGSSTPLAKLRLDSFTNG 193

  Fly   195 GDAKGIDAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSLNYCRMANDEEE 259
            .|:..::|:.:|         ..|.:.|..|.:..:.|..|.||..:.||:..|.........|.
  Rat   194 RDSWELEAVEKE---------ALAKEEHRRGTELFRAGNPQGAARCYGRALRLLLTLPPPGPPER 249

  Fly   260 RKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGNPSC-----------KALFQEGRAL 313
                   |.|:.||           .||.::  |.|..:...||           |||::.|.|.
  Rat   250 -------TILHANL-----------AACQLL--LGHPQLAAQSCDRVLEREPGHLKALYRRGVAQ 294

  Fly   314 AALGEYNLARNAYLQAQAKQPANKEISDEI 343
            ||||:.:.|.....:..|..|.|:...:|:
  Rat   295 AALGDLDKATADLKKVLAVDPKNRAAKEEL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:459735 22/96 (23%)
TPR repeat 218..257 CDD:276809 10/38 (26%)
TPR 230..>389 CDD:440225 32/125 (26%)
TPR repeat 262..295 CDD:276809 7/32 (22%)
TPR repeat 304..329 CDD:276809 10/24 (42%)
FkbplNP_001002818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 4/13 (31%)
TPR 1 208..241 10/32 (31%)
TPR repeat 208..236 CDD:276809 9/27 (33%)
TPR 212..>336 CDD:440225 34/133 (26%)
TPR repeat 249..279 CDD:276809 10/49 (20%)
TPR 2 250..283 10/45 (22%)
TPR 3 284..317 12/32 (38%)
TPR repeat 284..312 CDD:276809 10/27 (37%)

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