DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkbp6

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_989052.1 Gene:fkbp6 / 394649 XenbaseID:XB-GENE-942472 Length:305 Species:Xenopus tropicalis


Alignment Length:320 Identity:96/320 - (30%)
Similarity:163/320 - (50%) Gaps:40/320 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FDELRALMSEI--DENIYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAPFDSSLLRGSKFVF 133
            |.:|...|.::  |..:.|.:.|.|...:  ||..|.|.::||||.|....|||:|..|....:.
 Frog     5 FHQLAQQMEDVSGDRGVLKEVIRPGKGGK--VPCDATVILKYSGYLEHADKPFDTSCYRRHPKMM 67

  Fly   134 ETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELGCPPRIKPKADALFKVEVIDYSLIGDAK 198
            :.|:...:.|:|:.:.:|:..|.:.|:.|.|..:|.|||.|.|.|.|..||::|::|:       
 Frog    68 KLGEDITLSGMEIGLLTMQRGELSRFLFSPKYAYGTLGCSPLIPPSATVLFEIELLDF------- 125

  Fly   199 GIDAIPQEDRDKFCVVYPK-----AVD--LHLHGKDS------VKLGRYQSAATAFERAVSSLNY 250
                :...:.|.||.:.|:     ::|  :.:.|.:.      .|..|:..|...::||.|.|: 
 Frog   126 ----LDTAESDLFCALSPEVQATFSLDKIIKIAGTEREFGNYLFKRNRFYDARDRYKRASSVLS- 185

  Fly   251 CRMANDEEERKQTE---LLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGNPSCKALFQEGRA 312
            |: |:.|||||..|   |...|  ||.:.|.|:.:|.||  :....:.|::.|.:.||||:.|:|
 Frog   186 CK-ASCEEERKLLEAAQLFVAL--NLSLTYLKLERPSRA--LKWGEKALSIDNRNTKALFRCGQA 245

  Fly   313 LAALGEYNLARNAYLQAQAKQPANKEISDEIISMNKRISKYEEASRD---IWARAFSLKN 369
            ...:.||:.|||..|:||..:|.|.||::|:..::.....|.:..|:   :..|:.|:::
 Frog   246 CLEMREYDKARNYLLKAQWLEPYNPEINNELKRLSSCYQDYMDKEREMCFLMFRSLSMRH 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 33/92 (36%)
TPR repeat 218..257 CDD:276809 11/46 (24%)
TPR repeat 262..295 CDD:276809 10/35 (29%)
TPR repeat 304..329 CDD:276809 12/24 (50%)
fkbp6NP_989052.1 FKBP_C 37..123 CDD:306713 31/85 (36%)
TPR_11 <142..>276 CDD:330823 46/139 (33%)
TPR repeat 187..231 CDD:276809 17/48 (35%)
TPR repeat 236..262 CDD:276809 12/25 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I9907
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2672
Inparanoid 1 1.050 124 1.000 Inparanoid score I4572
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1465346at2759
OrthoFinder 1 1.000 - - FOG0004027
OrthoInspector 1 1.000 - - oto104075
Panther 1 1.100 - - LDO PTHR46674
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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