DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and fkbp8

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_957178.1 Gene:fkbp8 / 393858 ZFINID:ZDB-GENE-040426-1849 Length:406 Species:Danio rerio


Alignment Length:393 Identity:90/393 - (22%)
Similarity:159/393 - (40%) Gaps:70/393 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LVKKGVEFEVDNSQQNHARDLGLDSDSDSD---YEDALDVDGEELRSPWTYSFDELRALMSEIDE 83
            |.||.....:.:|:::......|:.|.|.|   .|||  ..|::..||......|.::..|...|
Zfish    19 LAKKSAGASLLDSREDFEMLEHLEDDVDDDLPPLEDA--GGGKKKSSPAKDPAKEDKSAESPSAE 81

  Fly    84 -----------NIYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAPFDSSLLRGS------KF 131
                       .:.|::...| ...::.|.|.          :..|....::|..|:      ..
Zfish    82 PEEWLDVLGNGQLRKKVLEAG-AGPDSRPQKG----------QNVTIHLKTALTNGTVVDELKDL 135

  Fly   132 VFETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELG-CPPRIKPKADALFKVEVIDYSLIG 195
            .|..|.|.|::.|::.|:.|...|:|....:.|..:|.|| ..|.:.|.||.|.:|:::.   ..
Zfish   136 SFTLGDGDVLQALDLTVQLMEMGEKALIEAAAKYAYGALGSSAPAVPPDADLLLEVQLLS---AD 197

  Fly   196 DAKGIDAIPQEDRDKFCVVYPKAVDLHLHGKDSVKLGRYQSAATAFERAVSSLNYCRMAND---- 256
            :|..::.:|..:|  ..:...|....::|         ||.|..||  ||:|........:    
Zfish   198 EALDLELMPPSER--IILANRKRERGNVH---------YQRADYAF--AVNSYGIALQITEASSR 249

  Fly   257 -----EEERKQTELLTTLNQNLMIVYNKMNKPK---RACIMMKALRHLTMGNP-SCKALFQEGRA 312
                 |||.:..::......|:.....|::..:   |:|:  ..|.|    .| :.||||::|:.
Zfish   250 VDISQEEEEELLDMKVKCLNNMAAAQLKLDHYEAALRSCV--SVLAH----QPDNVKALFRKGKV 308

  Fly   313 LAALGEYNLARNAYLQAQAKQPANKEISDEIISMNKRISKYEEASRDIWARAFSLKNSKSDVRKT 377
            ||..||:..|......|...:|:||.|..|:..:.|:.|:.:.|.:.::.:... ..|.|.|:|.
Zfish   309 LALQGEFAEAIKTLKMALKLEPSNKTIHAELSKLVKKHSEQKGAEQAMYKKMLG-NPSNSSVQKH 372

  Fly   378 PAQ 380
            .|:
Zfish   373 RAK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 24/99 (24%)
TPR repeat 218..257 CDD:276809 9/47 (19%)
TPR repeat 262..295 CDD:276809 5/35 (14%)
TPR repeat 304..329 CDD:276809 10/24 (42%)
fkbp8NP_957178.1 FKBP_C 106..194 CDD:278674 24/97 (25%)
TPR_11 214..296 CDD:290150 19/98 (19%)
TPR repeat 214..259 CDD:276809 13/55 (24%)
TPR repeat 265..293 CDD:276809 4/29 (14%)
TPR_11 266..330 CDD:290150 18/69 (26%)
TPR repeat 298..328 CDD:276809 11/29 (38%)
TPR_1 299..332 CDD:278916 12/32 (38%)
TPR repeat 333..361 CDD:276809 6/27 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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