DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbp12

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_523792.2 Gene:Fkbp12 / 37214 FlyBaseID:FBgn0013954 Length:108 Species:Drosophila melanogaster


Alignment Length:88 Identity:29/88 - (32%)
Similarity:44/88 - (50%) Gaps:1/88 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 NKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLL 166
            |..:|:|.|:|..:..| .||||..|...|.|..|:|.|:.|.:..|..:...::|:.|.|....
  Fly    19 NGQKVTVHYTGTLDDGT-KFDSSRDRNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYA 82

  Fly   167 FGELGCPPRIKPKADALFKVEVI 189
            :|..|.|..|.|.:...|.||::
  Fly    83 YGSRGHPGVIPPNSTLTFDVELL 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 29/86 (34%)
TPR repeat 218..257 CDD:276809
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
Fkbp12NP_523792.2 FkpA <2..107 CDD:223619 29/88 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452519
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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