DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shu and Fkbp5

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_006256284.1 Gene:Fkbp5 / 361810 RGDID:1309155 Length:473 Species:Rattus norvegicus


Alignment Length:473 Identity:90/473 - (19%)
Similarity:162/473 - (34%) Gaps:125/473 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EFEVDNSQQNHARDLGLDSDSDSDYEDALDVDGEELRSPWTYSFDELRALMSEIDENIYKRITRT 92
            |.||...|:....|.|..::.::.....:: .||:              :.::.|..:.|.:.|.
  Rat     8 EAEVFYLQRTMTTDEGTSNNEENPAATVVE-QGED--------------ITTKKDRGVLKIVKRV 57

  Fly    93 GHVDREAVPNKARVSVRYSGYWEGETAPFDSSLLRGSKFVFETGQGTVVEGLEVAVRSMRPYEQA 157
            | ...|......:|.|.|.|.. .....||||..|...|||..|:|.|::..::.|.:|:..|..
  Rat    58 G-TSEETPMIGDKVYVHYKGKL-SNGKKFDSSRDRNEPFVFSLGKGQVIKAWDIGVSTMKKGEIC 120

  Fly   158 EFIISYKLLFGELGCPPRIKPKADALFKVEVIDYS------------------------------ 192
            ..:...:..:|..|..|:|...|...|::|::|:.                              
  Rat   121 HLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDSGIIRRIKRKGEGYSNPNEGATV 185

  Fly   193 --------------------LIGDAK------GID-AIPQEDRDKFCVVY------------PK- 217
                                :||:.:      ||| |:.:..|::.|::|            || 
  Rat   186 EVHLEGCCAGRVFDCRDVVFVIGEGEDHDIPIGIDKALEKMQREEQCILYLGPQYGFGEAGKPKF 250

  Fly   218 ----------------------------------AVDLHLHGKDSVKLGRYQSAATAFERAVSSL 248
                                              |..:...|....|.|:|..|...:.:.||.|
  Rat   251 GIEPNAELMYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL 315

  Fly   249 NYCRMANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMMKALRHLTMGNPSCKALFQEGRAL 313
            ......:::|.:.....|.....||.:.|.|:.:..:|.........|...|.  |.|::.|.|.
  Rat   316 EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE--KGLYRRGEAQ 378

  Fly   314 AALGEYNLARNAYLQAQAKQPANKEISDEIISMNKRISKYEEASRDIWARAFSLKNSKSDVRKTP 378
            ..:.|:..|:..:.:.....|.||....:|....::..::.|..|.::|..|. |.::.|.::..
  Rat   379 LLMNEFESAKGDFEKVLEVNPQNKAARLQISVCQRKAKEHNERDRRVYANMFK-KFAEQDAKEEA 442

  Fly   379 AQ-LEKEAKEQDFNDKME 395
            :: |.|:|.|.....|.|
  Rat   443 SKALSKKAVEGAAGKKHE 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 26/92 (28%)
TPR repeat 218..257 CDD:276809 9/38 (24%)
TPR repeat 262..295 CDD:276809 6/32 (19%)
TPR repeat 304..329 CDD:276809 6/24 (25%)
Fkbp5XP_006256284.1 FKBP_C 61..152 CDD:278674 26/91 (29%)
TPR_11 284..364 CDD:290150 16/79 (20%)
TPR repeat 285..313 CDD:276809 6/27 (22%)
TPR_11 336..399 CDD:290150 13/64 (20%)
TPR 336..367 CDD:197478 6/30 (20%)
TPR repeat 336..362 CDD:276809 5/25 (20%)
TPR repeat 367..397 CDD:276809 7/31 (23%)
TPR_1 369..401 CDD:278916 7/31 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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