DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and Fkbp3

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001100206.2 Gene:Fkbp3 / 299104 RGDID:1304992 Length:224 Species:Rattus norvegicus


Alignment Length:189 Identity:48/189 - (25%)
Similarity:74/189 - (39%) Gaps:44/189 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SYSDLVK----KGVEFEVDNSQQNHARDLGLDSDSDSDYEDALDVDGEELRSPWTYSFDELRALM 78
            :|:.|.:    ||.|.....|:|.....|..|...||..|:.||      ..|..|:        
  Rat    62 AYNHLFESKRFKGTETISKVSEQVKNVKLNDDKQKDSKSEETLD------EGPPKYT-------- 112

  Fly    79 SEIDENIYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAP----FDSSLLRGSK-------FV 132
                    |.:.:.|  |:...|.|..|    ...|...|.|    ||:::...||       ..
  Rat   113 --------KSVLKKG--DKTNFPKKGDV----VHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLS 163

  Fly   133 FETGQGTVVEGLEVAVRSMRPYEQAEFIISYKLLFGELGCP-PRIKPKADALFKVEVID 190
            |:.|.|.|:.|.:.|:.:|...|:|...|..:..:|:.|.| .:|.|....:|:||::|
  Rat   164 FKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVD 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674 29/104 (28%)
TPR repeat 218..257 CDD:276809
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
Fkbp3NP_001100206.2 BTHB 6..76 CDD:408209 4/13 (31%)
FKBP_C 124..221 CDD:395196 28/100 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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