DRSC/TRiP Functional Genomics Resources

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Protein Alignment shu and AT3G52075

DIOPT Version :9

Sequence 1:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001327898.1 Gene:AT3G52075 / 28719398 AraportID:AT3G52075 Length:57 Species:Arabidopsis thaliana


Alignment Length:16 Identity:5/16 - (31%)
Similarity:9/16 - (56%) Gaps:0/16 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 QSAATAFERAVSSLNY 250
            ::.|:.|.....|||:
plant    27 EALASPFGSKTKSLNW 42

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shuNP_611837.1 FKBP_C 96..189 CDD:278674
TPR repeat 218..257 CDD:276809 5/16 (31%)
TPR repeat 262..295 CDD:276809
TPR repeat 304..329 CDD:276809
AT3G52075NP_001327898.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004027
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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